19 homologs were found in PanDaTox collection
for query gene PXO_00427 on replicon NC_010717
Organism: Xanthomonas oryzae pv. oryzae PXO99A



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010717  PXO_00427  transcriptional regulator, HTH motif containing  100 
 
 		 61 aa  126  8.000000000000001e-29  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_4372  CopG family transcriptional regulator  90.16 
 
 		 92 aa  114  6e-25  Burkholderia ambifaria MC40-6  Bacteria  normal  0.98164  normal  1 
 
 
-
 
NC_012854  Rleg_6360  transcriptional regulator, CopG family  75.41 
 
 		 92 aa  99.4  1e-20  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_1797  CopG family transcriptional regulator  62.3 
 
 		 94 aa  84.7  4e-16  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.50125 
 
 
-
 
NC_009438  Sputcn32_3515  CopG family transcriptional regulator  62.3 
 
 		 94 aa  84.7  4e-16  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_1769  CopG family transcriptional regulator  62.3 
 
 		 94 aa  83.6  9e-16  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.731285 
 
 
-
 
NC_008786  Veis_2427  CopG family transcriptional regulator  63.33 
 
 		 100 aa  82  0.000000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1692  CopG family transcriptional regulator  59.02 
 
 		 94 aa  77.4  0.00000000000007  Shewanella sp. MR-4  Bacteria  normal  0.542112  normal  0.0225811 
 
 
-
 
NC_008786  Veis_3354  CopG family transcriptional regulator  54.1 
 
 		 90 aa  75.5  0.0000000000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.010277  normal  0.252149 
 
 
-
 
NC_009832  Spro_0926  CopG family transcriptional regulator  58.33 
 
 		 92 aa  75.5  0.0000000000002  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_1445  CopG family transcriptional regulator  64.15 
 
 		 102 aa  75.1  0.0000000000003  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_002947  PP_2499  hypothetical protein  55 
 
 		 90 aa  74.3  0.0000000000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013421  Pecwa_0502  transcriptional regulator, CopG family  54.1 
 
 		 96 aa  70.9  0.000000000006  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0423  transcriptional regulator, CopG family  54.1 
 
 		 96 aa  68.6  0.00000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.416536  n/a   
 
 
-
 
NC_013173  Dbac_2575  CopG family transcriptional regulator  51.67 
 
 		 97 aa  65.5  0.0000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.888914  n/a   
 
 
-
 
NC_009704  YpsIP31758_A0043  hypothetical protein  51.72 
 
 		 96 aa  62.4  0.000000002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009483  Gura_1249  transcriptional regulator-like protein  44.83 
 
 		 121 aa  56.2  0.0000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000553131  n/a   
 
 
-
 
NC_007514  Cag_0584  hypothetical protein  36.84 
 
 		 91 aa  42.7  0.001  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.00104491  n/a   
 
 
-
 
NC_010803  Clim_0112  hypothetical protein  44.44 
 
 		 89 aa  40.4  0.009  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
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