77 homologs were found in PanDaTox collection
for query gene Ppha_0145 on replicon NC_011060
Organism: Pelodictyon phaeoclathratiforme BU-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011060  Ppha_0145  hypothetical protein  100 
 
 		 89 aa  187  5.999999999999999e-47  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.399898  n/a   
 
 
-
 
NC_010831  Cphamn1_0140  hypothetical protein  92.05 
 
 		 118 aa  171  2.9999999999999996e-42  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.736337 
 
 
-
 
NC_008639  Cpha266_1216  hypothetical protein  88.64 
 
 		 89 aa  169  2e-41  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.676541  n/a   
 
 
-
 
NC_010803  Clim_0112  hypothetical protein  85.23 
 
 		 89 aa  163  5.9999999999999996e-40  Chlorobium limicola DSM 245  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_0805  hypothetical protein  81.82 
 
 		 89 aa  158  2e-38  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.113601  normal  1 
 
 
-
 
NC_007512  Plut_0979  hypothetical protein  86.36 
 
 		 256 aa  140  4e-33  Chlorobium luteolum DSM 273  Bacteria  normal  0.346318  normal  1 
 
 
-
 
NC_008786  Veis_2427  CopG family transcriptional regulator  38.55 
 
 		 100 aa  66.6  0.0000000001  Verminephrobacter eiseniae EF01-2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_1249  transcriptional regulator-like protein  44.3 
 
 		 121 aa  66.2  0.0000000002  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000553131  n/a   
 
 
-
 
NC_009832  Spro_0926  CopG family transcriptional regulator  34.09 
 
 		 92 aa  65.1  0.0000000003  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1769  CopG family transcriptional regulator  36.26 
 
 		 94 aa  60.5  0.000000008  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.731285 
 
 
-
 
NC_009438  Sputcn32_3515  CopG family transcriptional regulator  34.52 
 
 		 94 aa  58.9  0.00000002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1797  CopG family transcriptional regulator  34.52 
 
 		 94 aa  58.9  0.00000002  Shewanella sp. ANA-3  Bacteria  normal  1  normal  0.50125 
 
 
-
 
NC_008786  Veis_3354  CopG family transcriptional regulator  32.94 
 
 		 90 aa  57.8  0.00000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.010277  normal  0.252149 
 
 
-
 
NC_013173  Dbac_2575  CopG family transcriptional regulator  36.14 
 
 		 97 aa  57.4  0.00000007  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.888914  n/a   
 
 
-
 
NC_013421  Pecwa_0502  transcriptional regulator, CopG family  33.72 
 
 		 96 aa  57  0.00000009  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_010552  BamMC406_4372  CopG family transcriptional regulator  31.82 
 
 		 92 aa  56.6  0.0000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.98164  normal  1 
 
 
-
 
NC_012854  Rleg_6360  transcriptional regulator, CopG family  31.82 
 
 		 92 aa  56.2  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_1692  CopG family transcriptional regulator  33.33 
 
 		 94 aa  56.2  0.0000001  Shewanella sp. MR-4  Bacteria  normal  0.542112  normal  0.0225811 
 
 
-
 
NC_004347  SO_1445  CopG family transcriptional regulator  36.99 
 
 		 102 aa  56.2  0.0000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009704  YpsIP31758_A0043  hypothetical protein  32.53 
 
 		 96 aa  55.1  0.0000003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_2499  hypothetical protein  38.57 
 
 		 90 aa  55.5  0.0000003  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_0423  transcriptional regulator, CopG family  32.56 
 
 		 96 aa  52  0.000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.416536  n/a   
 
 
-
 
NC_012912  Dd1591_0149  delta-1-pyrroline-5-carboxylate dehydrogenase  55.81 
 
 		 1325 aa  51.2  0.000005  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_3171  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1326 aa  50.8  0.000006  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_3496  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1323 aa  50.8  0.000006  Ralstonia pickettii 12J  Bacteria  normal  0.271253  normal  1 
 
 
-
 
NC_002947  PP_4947  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  49.7  0.00001  Pseudomonas putida KT2440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010322  PputGB1_4996  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  49.7  0.00001  Pseudomonas putida GB-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010501  PputW619_0521  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  50.1  0.00001  Pseudomonas putida W619  Bacteria  normal  1  normal  0.0520721 
 
 
-
 
NC_003295  RSc3301  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1325 aa  49.7  0.00001  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  0.584307 
 
 
-
 
NC_009512  Pput_4819  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  49.7  0.00001  Pseudomonas putida F1  Bacteria  normal  1  normal  0.952449 
 
 
-
 
NC_011094  SeSA_A1188  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1320 aa  49.7  0.00002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.978616  normal  1 
 
 
-
 
NC_004578  PSPTO_5017  bifunctional putA protein  53.49 
 
 		 1317 aa  49.3  0.00002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.268901  n/a   
 
 
-
 
NC_011080  SNSL254_A1218  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1320 aa  49.7  0.00002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.170223  normal  0.434461 
 
 
-
 
NC_007005  Psyr_0506  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  49.3  0.00002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011083  SeHA_C1233  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1320 aa  49.3  0.00002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  1  normal  0.644344 
 
 
-
 
NC_011149  SeAg_B1083  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1320 aa  49.7  0.00002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011205  SeD_A1198  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1320 aa  49.7  0.00002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007492  Pfl01_0452  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1317 aa  49.3  0.00002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_3489  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  51.16 
 
 		 1320 aa  48.5  0.00003  Cupriavidus metallidurans CH34  Bacteria  normal  0.376631  normal  0.245835 
 
 
-
 
NC_009436  Ent638_1541  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.66 
 
 		 1320 aa  48.1  0.00004  Enterobacter sp. 638  Bacteria  normal  1  normal  0.174773 
 
 
-
 
NC_012892  B21_01024  hypothetical protein  47.73 
 
 		 1320 aa  47.8  0.00005  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
CP001509  ECD_01017  fused DNA-binding transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00005  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A3340  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  51.16 
 
 		 1322 aa  47.8  0.00005  Ralstonia eutropha JMP134  Bacteria  normal  0.0996767  n/a   
 
 
-
 
CP001637  EcDH1_2628  delta-1-pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli DH1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010498  EcSMS35_2111  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli SMS-3-5  Bacteria  normal  0.384648  normal  1 
 
 
-
 
NC_010658  SbBS512_E2304  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_011353  ECH74115_1251  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  1  normal  0.63555 
 
 
-
 
NC_012917  PC1_4017  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.49 
 
 		 1322 aa  47.8  0.00006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.77127  n/a   
 
 
-
 
NC_010468  EcolC_2581  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.0830749 
 
 
-
 
NC_009800  EcHS_A1129  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli HS  Bacteria  normal  0.99011  n/a   
 
 
-
 
NC_009801  EcE24377A_1132  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  47.8  0.00006  Escherichia coli E24377A  Bacteria  normal  0.585583  n/a   
 
 
-
 
NC_009832  Spro_2931  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1323 aa  47  0.00009  Serratia proteamaculans 568  Bacteria  normal  0.637197  normal  1 
 
 
-
 
NC_013421  Pecwa_4209  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  53.66 
 
 		 1322 aa  46.6  0.0001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2369  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  48.84 
 
 		 1323 aa  46.2  0.0002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.557702  n/a   
 
 
-
 
NC_009074  BURPS668_3958  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0002  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1110  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  48.84 
 
 		 1311 aa  45.8  0.0002  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.471549 
 
 
-
 
NC_009708  YpsIP31758_2268  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  48.84 
 
 		 1323 aa  46.2  0.0002  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2037  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  48.84 
 
 		 1323 aa  46.2  0.0002  Yersinia pestis Angola  Bacteria  normal  1  normal  0.851494 
 
 
-
 
NC_008785  BMASAVP1_A3345  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010508  Bcenmc03_0128  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia cenocepacia MC0-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006348  BMA2965  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.0460419  n/a   
 
 
-
 
NC_007434  BURPS1710b_0166  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia pseudomallei 1710b  Bacteria  normal  0.996666  n/a   
 
 
-
 
NC_007510  Bcep18194_A3294  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia sp. 383  Bacteria  normal  0.129835  normal  1 
 
 
-
 
NC_007651  BTH_I3301  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia thailandensis E264  Bacteria  normal  0.621303  n/a   
 
 
-
 
NC_008060  Bcen_2942  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.343978  n/a   
 
 
-
 
NC_008390  Bamb_0103  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_008542  Bcen2424_0113  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia cenocepacia HI2424  Bacteria  normal  1  n/a   
 
 
-
 
NC_008836  BMA10229_A1576  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia mallei NCTC 10229  Bacteria  normal  0.388891  n/a   
 
 
-
 
NC_010551  BamMC406_0112  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia ambifaria MC40-6  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009076  BURPS1106A_4032  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009080  BMA10247_3026  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1309 aa  45.4  0.0003  Burkholderia mallei NCTC 10247  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0114  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  50 
 
 		 1310 aa  45.4  0.0003  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007951  Bxe_A0049  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  37.14 
 
 		 1309 aa  44.3  0.0005  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010681  Bphyt_3887  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1309 aa  44.3  0.0006  Burkholderia phytofirmans PsJN  Bacteria  normal  0.471061  normal  1 
 
 
-
 
NC_010622  Bphy_3018  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  47.73 
 
 		 1320 aa  43.9  0.0008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010002  Daci_5941  trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase  40.91 
 
 		 1345 aa  42  0.003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_03468  transcriptional regulator, CopG family  45.45 
 
 		 82 aa  41.6  0.004  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
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