20 homologs were found in PanDaTox collection
for query gene Slin_2157 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_2157  transcriptional regulator, PadR-like family  100 
 
 
112 aa  220  6e-57  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0933  transcriptional regulator, PadR-like family  55.86 
 
 
112 aa  124  3e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.886495 
 
 
-
 
NC_013730  Slin_0924  transcriptional regulator, PadR-like family  58.04 
 
 
112 aa  121  3e-27  Spirosoma linguale DSM 74  Bacteria  normal  0.240063  normal  0.8362 
 
 
-
 
NC_013730  Slin_4620  transcriptional regulator, PadR-like family  57.14 
 
 
112 aa  120  8e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.320859 
 
 
-
 
NC_013730  Slin_0949  transcriptional regulator, PadR-like family  59.8 
 
 
112 aa  119  9.999999999999999e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_2205  transcriptional regulator, PadR-like family  53.27 
 
 
108 aa  116  9e-26  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00547301 
 
 
-
 
NC_013037  Dfer_0141  transcriptional regulator, PadR-like family  51.92 
 
 
106 aa  116  9.999999999999999e-26  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.990112  normal 
 
 
-
 
NC_013730  Slin_3313  transcriptional regulator, PadR-like family  53.4 
 
 
119 aa  112  2.0000000000000002e-24  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0930  transcriptional regulator, PadR-like family  53.92 
 
 
111 aa  109  2.0000000000000002e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0940  transcriptional regulator, PadR-like family  49.04 
 
 
108 aa  108  3e-23  Spirosoma linguale DSM 74  Bacteria  normal  0.795743  normal  0.552742 
 
 
-
 
NC_013730  Slin_3773  transcriptional regulator, PadR-like family  46.36 
 
 
111 aa  104  4e-22  Spirosoma linguale DSM 74  Bacteria  normal  0.803247  normal 
 
 
-
 
NC_013037  Dfer_3135  transcriptional regulator, PadR-like family  48.21 
 
 
117 aa  103  7e-22  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0945  transcriptional regulator, PadR-like family  50 
 
 
112 aa  98.2  3e-20  Spirosoma linguale DSM 74  Bacteria  normal  0.474033  normal 
 
 
-
 
NC_013037  Dfer_1451  transcriptional regulator, PadR-like family  55.86 
 
 
112 aa  97.4  5e-20  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.651305 
 
 
-
 
NC_013730  Slin_2082  transcriptional regulator, PadR-like family  49.09 
 
 
111 aa  93.6  8e-19  Spirosoma linguale DSM 74  Bacteria  normal  0.40461  normal 
 
 
-
 
NC_013730  Slin_1759  transcriptional regulator, PadR-like family  44.66 
 
 
120 aa  88.6  2e-17  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013037  Dfer_1557  transcriptional regulator, PadR-like family  43.69 
 
 
111 aa  89  2e-17  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.500407 
 
 
-
 
NC_008009  Acid345_1284  PadR family transcriptional regulator  30.23 
 
 
121 aa  42  0.003  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.865226  normal 
 
 
-
 
NC_009632  SaurJH1_2773  transcriptional regulator PadR family protein  23.81 
 
 
112 aa  41.2  0.005  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.480734  n/a   
 
 
-
 
NC_009487  SaurJH9_2716  PadR-like family transcriptional regulator  23.81 
 
 
112 aa  41.2  0.005  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.0032771  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>