Gene Dfer_1557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1557 
Symbol 
ID8225128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1859661 
End bp1859996 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content60% 
IMG OID644929415 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003085967 
Protein GI255035346 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.500407 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGGA CCAACCTGGG GGAGTTTGAA GAGCTGGTAT TGCTCACGAT CGCGGCATTG 
GGCCGGGAGG CATACAGCGT GGCCATTTGC GACGAGCTCG AACGATACAC CGGCCGCTCG
GCTAAGCTGG GCGTGGTGCA TGCCGTGCTC AATCGGCTGG AAGAAAAAGG GCTTGCGAAA
AGCCAGCTCG GCGACGCCAG CGCCACTCGC GGCGGCAAGC GGAAGCGGTA TTACGAAGTG
AGCCACGCAG GCAAGGTGGC GCTCATGCGT GCGAAGGAGC TGCGCGAAAC GATCTGGCGC
AACATTCCCG GCTTTAACCT CGAAGGTTCG ATATGA
 
Protein sequence
MKGTNLGEFE ELVLLTIAAL GREAYSVAIC DELERYTGRS AKLGVVHAVL NRLEEKGLAK 
SQLGDASATR GGKRKRYYEV SHAGKVALMR AKELRETIWR NIPGFNLEGS I