| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0924 |
|---|
| Symbol | |
|---|
| ID | 8724654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 1103241 |
|---|
| End bp | 1103579 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003385775 |
|---|
| Protein GI | 284035845 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.240063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.8362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGAA CCTATTTAGG CGAATTTGAA GAAGTGGTAT TGCTGATGGT CGCTATCCTG
GATGGCGAAG GGTATGGCGT TACAGTCAGT CAGGCACTGG AAGAGCATAC TGGCCGAATT
GTGACGTTTG GCACGGTGCA TAACACGCTG ATTCGGTTGG AAGAGAAAGG GTTTGTTCAT
TCTGAGTTGG GCGGGGCTAC CGCCGAGCGG GGTGGCCGAC GCAAGCGGCT GTTTCGGGTG
ACGGCGTTAG GCAGCCGGGC GTTGCAGGAG ATTCAGCAAC TACGGCAGGA ATTATGGCAG
ATGGTGCCCC CCAGTACACT TCAACTTGGC GGGCTATGA
|
|---|
| Protein sequence | MRRTYLGEFE EVVLLMVAIL DGEGYGVTVS QALEEHTGRI VTFGTVHNTL IRLEEKGFVH
SELGGATAER GGRRKRLFRV TALGSRALQE IQQLRQELWQ MVPPSTLQLG GL
|
|---|
| |