Gene Slin_3313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_3313 
Symbol 
ID8727066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp4010689 
End bp4011048 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content53% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003388123 
Protein GI284038193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGTT TTCCGGAAGC GCCACCCGTT ATGACCAGAG CTTATTTAGG TGAATTTGAA 
GAGCTGGTAC TGCTGACAGT AGCGGTACTG GAAGGGCAGG CCTATGGAGT TACCGTTGCG
GCCGAACTCA AGCAACGTAC CAATCGAACC ATTAGCCTGA GTGGCGTTCA TATTGCGCTG
TACCGGCTGG AGGAAAAAGG ATTCGTACTA TCCGAGTTGG GGGGTGCCAC AACCGCCCGT
GGCGGACGCC GGAAGCGATT CTTTATGGTA ACAGCCCAGG GAAAGCAAAC CCTTAGCGAG
ATACGGGATG TACGCAATCA ACTTTGGGAC TCCATTCCAA CTACCCCTTC TCTAACGTAG
 
Protein sequence
MASFPEAPPV MTRAYLGEFE ELVLLTVAVL EGQAYGVTVA AELKQRTNRT ISLSGVHIAL 
YRLEEKGFVL SELGGATTAR GGRRKRFFMV TAQGKQTLSE IRDVRNQLWD SIPTTPSLT