Gene Slin_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_0940 
Symbol 
ID8724670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp1133396 
End bp1133722 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content57% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003385790 
Protein GI284035860 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.795743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.552742 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGAA CCTACTTAGG TGAGTTTGAA GAAGTGGTAT TGCTGGCAGT GGCGATCCGG 
TCAGGAGATG CCTACGGTGC GGCTGTTGTC ACGGAGATTG AGCGGCAAAT GAACCGCTCT
GTGAACCTGG GTGCCGTCCA CTCAGCCCTG AACCGTCTCG CCGAAAAAGG GCTTGTAAAA
TCGGAGTTAG GGGGTGTTAC CACCGAACGG GGCGGACGAC GCAAACGCCT TTACTCGGTT
ACTGCAGCTG GCCATCGGGC ATTGCAGGAA GTCCGGCAGG TGCGCAATCA GATGTGGGAA
GCCATTCCAA ACACGGCCTG GTCATGA
 
Protein sequence
MKGTYLGEFE EVVLLAVAIR SGDAYGAAVV TEIERQMNRS VNLGAVHSAL NRLAEKGLVK 
SELGGVTTER GGRRKRLYSV TAAGHRALQE VRQVRNQMWE AIPNTAWS