Gene Slin_2205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_2205 
Symbol 
ID8725943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp2672436 
End bp2672762 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content51% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003387026 
Protein GI284037096 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.00547301 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAGAA CGTATCTGGG AGAATTTGAA GAACTCGTGT TGTTGACCGT TGCCATCCTT 
AACGGGGCTG CCTATGGACT TAATATCGCC GAAGAACTTA AACAGCGAAC CGACCGCACC
ATTAATCTCA GTGGGGTTCA TGTGGCCTTA TATCGCCTGG AAGAAAAAGG CTTTGTCCAA
TCGGAATTAG GGGGGGCCAC CCCCGCTCGG GGAGGACGCA GTAAGCGACT CTTCTCCATC
ACAGCCTATG GCAAACGGAC CCTGGATGAA CTGCGGCAAG TACGAAACAA TCTGTGGAAT
GAGATACCGA ACCTGTCCTT CTCCTAA
 
Protein sequence
MGRTYLGEFE ELVLLTVAIL NGAAYGLNIA EELKQRTDRT INLSGVHVAL YRLEEKGFVQ 
SELGGATPAR GGRSKRLFSI TAYGKRTLDE LRQVRNNLWN EIPNLSFS