19 homologs were found in PanDaTox collection
for query gene Slin_0945 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_0945  transcriptional regulator, PadR-like family  100 
 
 
112 aa  226  6e-59  Spirosoma linguale DSM 74  Bacteria  normal  0.474033  normal 
 
 
-
 
NC_013730  Slin_0949  transcriptional regulator, PadR-like family  63.39 
 
 
112 aa  145  2.0000000000000003e-34  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0933  transcriptional regulator, PadR-like family  65.69 
 
 
112 aa  134  4e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.886495 
 
 
-
 
NC_013730  Slin_2205  transcriptional regulator, PadR-like family  55.77 
 
 
108 aa  127  4.0000000000000003e-29  Spirosoma linguale DSM 74  Bacteria  normal  hitchhiker  0.00547301 
 
 
-
 
NC_013037  Dfer_0141  transcriptional regulator, PadR-like family  55.24 
 
 
106 aa  125  2.0000000000000002e-28  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.990112  normal 
 
 
-
 
NC_013730  Slin_4620  transcriptional regulator, PadR-like family  60 
 
 
112 aa  125  3e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.320859 
 
 
-
 
NC_013730  Slin_0940  transcriptional regulator, PadR-like family  58.65 
 
 
108 aa  124  4.0000000000000003e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.795743  normal  0.552742 
 
 
-
 
NC_013730  Slin_3313  transcriptional regulator, PadR-like family  57.41 
 
 
119 aa  124  6e-28  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0924  transcriptional regulator, PadR-like family  59.05 
 
 
112 aa  123  8.000000000000001e-28  Spirosoma linguale DSM 74  Bacteria  normal  0.240063  normal  0.8362 
 
 
-
 
NC_013037  Dfer_3135  transcriptional regulator, PadR-like family  57.28 
 
 
117 aa  119  9.999999999999999e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_0930  transcriptional regulator, PadR-like family  55.88 
 
 
111 aa  118  3.9999999999999996e-26  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_1759  transcriptional regulator, PadR-like family  51.4 
 
 
120 aa  108  2.0000000000000002e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_3773  transcriptional regulator, PadR-like family  50 
 
 
111 aa  102  1e-21  Spirosoma linguale DSM 74  Bacteria  normal  0.803247  normal 
 
 
-
 
NC_013037  Dfer_1451  transcriptional regulator, PadR-like family  54.55 
 
 
112 aa  101  3e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.651305 
 
 
-
 
NC_013037  Dfer_1557  transcriptional regulator, PadR-like family  48.48 
 
 
111 aa  101  4e-21  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.500407 
 
 
-
 
NC_013730  Slin_2082  transcriptional regulator, PadR-like family  47.71 
 
 
111 aa  89  2e-17  Spirosoma linguale DSM 74  Bacteria  normal  0.40461  normal 
 
 
-
 
NC_013730  Slin_2157  transcriptional regulator, PadR-like family  49.35 
 
 
112 aa  76.6  0.0000000000001  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_2059  PadR family transcriptional regulator  35.21 
 
 
127 aa  42.4  0.002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2046  PadR family transcriptional regulator  32.53 
 
 
109 aa  40.4  0.008  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
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