Gene Slin_4620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_4620 
Symbol 
ID8728384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp5616889 
End bp5617227 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content58% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003389397 
Protein GI284039467 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.320859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGAA CGTATTTAGG CGAGTTTGAG GAAGTGGTCC TGCTCATGGT TGCCATTCTG 
GATGGCGAAG GCTACGGCGT TACGGTCAGT CAGGCGCTGG AAGAGCACAC GGGTCGGGTG
GTTACCTTCG GTACTGTTCA CAACACCCTC ATCAGGCTGG AAGAGAAAGG CTTTGTGCAG
TCTGAACTGG GCGGAGCCAC TGCCGAACGG GGTGGTCGGC GCAAGCGGCT TTTCCGGGTT
ACGGCCCTGG GTAGCCGGGC GTTGCAGGAA ATCCAGCAGC TTCGGCAGGA GTTATGGCAG
TTGGTTCCAC CTCACTCACT CCAACTTGGC GGGGTATGA
 
Protein sequence
MRRTYLGEFE EVVLLMVAIL DGEGYGVTVS QALEEHTGRV VTFGTVHNTL IRLEEKGFVQ 
SELGGATAER GGRRKRLFRV TALGSRALQE IQQLRQELWQ LVPPHSLQLG GV