| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_0945 |
|---|
| Symbol | |
|---|
| ID | 8724675 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 1140082 |
|---|
| End bp | 1140420 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003385795 |
|---|
| Protein GI | 284035865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.474033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGGA CCTACCTGGG CGAGTTTGAA GAGATTGTAC TGCTTACGGT AGCCGTGATG
GAGGGGCAGG CGTATGGCGT AGCCCTCACG CACGAGATCA TTGAGCAAAC CGGTCGTTCG
GTACGCCTGA ACCAGATTCA TGCTGCCTTA CAACGGTTGG AAGATAAAGG CATGGTGAAA
TCCGAAATGG GTGAGCCGAC TGCCGAACGT GGTGGTCGAC GGAAACGACT GTTTACCGTT
ACCGCATACG GTCGGCGGAC GTTGCAGGAA ATTCAGGAAG TTCGGGTTAG TCTGTGGAGC
CGCCTTGTCA ACCCATTCAA ACCCGTGACC AGCTTATGA
|
|---|
| Protein sequence | MKRTYLGEFE EIVLLTVAVM EGQAYGVALT HEIIEQTGRS VRLNQIHAAL QRLEDKGMVK
SEMGEPTAER GGRRKRLFTV TAYGRRTLQE IQEVRVSLWS RLVNPFKPVT SL
|
|---|
| |