31 homologs were found in PanDaTox collection
for query gene Pden_2355 on replicon NC_008686
Organism: Paracoccus denitrificans PD1222



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008686  Pden_2355  putative ABC transporter periplasmic solute-binding protein  100 
 
 		 329 aa  647    Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2671  hypothetical protein  59.69 
 
 		 323 aa  369  1e-101  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.25613  normal  1 
 
 
-
 
NC_009620  Smed_3935  putative ABC transporter periplasmic solute-binding protein  54.41 
 
 		 327 aa  347  2e-94  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_5748  putative ABC transporter periplasmic solute-binding protein  48.72 
 
 		 324 aa  275  8e-73  Methylobacterium sp. 4-46  Bacteria  normal  0.267021  normal  0.0239802 
 
 
-
 
NC_011894  Mnod_5973  putative ABC transporter periplasmic solute-binding protein  45.18 
 
 		 324 aa  255  7e-67  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0249466  n/a   
 
 
-
 
NC_011662  Tmz1t_2852  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  48.31 
 
 		 329 aa  254  2.0000000000000002e-66  Thauera sp. MZ1T  Bacteria  normal  0.174204  n/a   
 
 
-
 
NC_010505  Mrad2831_2777  putative ABC transporter periplasmic solute-binding protein  45.27 
 
 		 326 aa  246  6e-64  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0641341 
 
 
-
 
NC_003910  CPS_1928  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  40.88 
 
 		 332 aa  242  7.999999999999999e-63  Colwellia psychrerythraea 34H  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_009720  Xaut_1785  putative ABC transporter periplasmic solute-binding protein  42.56 
 
 		 341 aa  238  8e-62  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.388953 
 
 
-
 
NC_010725  Mpop_1758  putative ABC transporter periplasmic solute-binding protein  42.62 
 
 		 331 aa  223  4e-57  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_1864  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  35.29 
 
 		 346 aa  221  9.999999999999999e-57  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.114682  n/a   
 
 
-
 
NC_011757  Mchl_2142  putative ABC transporter periplasmic solute-binding protein  41.97 
 
 		 331 aa  220  1.9999999999999999e-56  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.297347  normal  0.343222 
 
 
-
 
NC_010172  Mext_1806  putative ABC transporter periplasmic solute-binding protein  41.97 
 
 		 331 aa  220  3e-56  Methylobacterium extorquens PA1  Bacteria  normal  0.592526  normal  0.965356 
 
 
-
 
NC_009485  BBta_5955  putative ABC transporter (substrate-binding protein)  35.35 
 
 		 331 aa  207  1e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.764168  normal  0.119821 
 
 
-
 
NC_011666  Msil_0012  ABC transporter substrate-binding protein  36.71 
 
 		 351 aa  201  1.9999999999999998e-50  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_013922  Nmag_2350  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  30.16 
 
 		 367 aa  129  7.000000000000001e-29  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013745  Htur_4594  putative ABC transporter periplasmic solute- binding protein  29.74 
 
 		 328 aa  120  3.9999999999999996e-26  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.751076  n/a   
 
 
-
 
NC_013595  Sros_1820  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  25.56 
 
 		 327 aa  50.1  0.00006  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.246405 
 
 
-
 
NC_007644  Moth_1973  NLPA lipoprotein  25.35 
 
 		 335 aa  48.1  0.0002  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.000000000524772  normal  1 
 
 
-
 
NC_003295  RSc3391  putative signal peptide protein  29.93 
 
 		 328 aa  48.1  0.0002  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007778  RPB_4058  twin-arginine translocation pathway signal  33.56 
 
 		 329 aa  44.7  0.002  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008701  Pisl_0357  extracellular solute-binding protein  33.33 
 
 		 270 aa  44.3  0.003  Pyrobaculum islandicum DSM 4184  Archaea  normal  1  normal  1 
 
 
-
 
NC_010172  Mext_3409  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  30.81 
 
 		 324 aa  43.9  0.004  Methylobacterium extorquens PA1  Bacteria  normal  0.932259  normal  1 
 
 
-
 
NC_007413  Ava_5012  ABC transporter, substrate-binding protein, aliphatic sulphonates  36.96 
 
 		 369 aa  43.9  0.004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0114898  normal  0.178041 
 
 
-
 
NC_012856  Rpic12D_3280  putative signal peptide protein  28.57 
 
 		 349 aa  43.5  0.004  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013739  Cwoe_3398  aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein  35.24 
 
 		 345 aa  43.9  0.004  Conexibacter woesei DSM 14684  Bacteria  normal  0.860812  normal  1 
 
 
-
 
NC_010725  Mpop_3602  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  29.8 
 
 		 324 aa  43.5  0.005  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.520581 
 
 
-
 
NC_012560  Avin_30510  ABC transporter periplasmic aliphatic sulfonate-binding protein  27.42 
 
 		 320 aa  43.1  0.006  Azotobacter vinelandii DJ  Bacteria  normal  0.846388  n/a   
 
 
-
 
NC_009668  Oant_3589  NMT1/THI5-like domain-containing protein  25.1 
 
 		 346 aa  42.7  0.008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_011757  Mchl_3718  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  30.81 
 
 		 324 aa  42.7  0.008  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.0485048 
 
 
-
 
NC_007492  Pfl01_3161  nitrate ABC transporter, periplasmic nitrate-binding protein, putative  29.22 
 
 		 467 aa  42.7  0.01  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.230597  normal  1 
 
 
-
 
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