Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_5012 |
Symbol | |
ID | 3679025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 6300326 |
End bp | 6301435 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637720372 |
Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
Protein accession | YP_325504 |
Protein GI | 75911208 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0114898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.178041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCAAT TAATAAAAGA TTTTGCAAAT ATATCTCAAG CGTGGACAAG TAAACGCACT ACTCGTCGTC ACGCCTTATT TGCCTTTGGC TGTAGCCTAG TATTGTCTAC CACACTATTT AGTTGCAGTC CTTCACAAAA TAATAACCAG CAACAAGCAT CTTCTTCCGC ATCTAATGTA GCAAATACAA ATGCTACTAA TAAAGTGGTG AGGATTGTCC GTTCCAAACA ATTGACAGCT TTAGCGGTTC TAGAACAAAA ACGTATTCTA GAAGAGCGAC TAAAACCTTT AGGTTACAAA GTAGAATGGC CTGAATTTGC TGCTGGCCCT CAGCAATTAG AAGCTTTGAA TACAGGCGCA CTGGATATTG CTTCAACTGC TGAATCACCT CCTATCTTTT CCCAAGCAGC AGGGACACCT CTAGTTTATT TAGCTGCTAA TTCTTCTGAT GGTAAAGCAG TGTCGCTATT AGTTCCTGCT AACTCTAATG TTAAAAGTGT TAAAGACTTA AAAGGCAAGA AAATTGCTTC TCAAAAAGCA TCTATCGGTC ACTATCTTAT AGTCAGAGCT GTAGAAAGAG AAGGTTTAAA ACTGAGTGAT ATACAGCCAG TTTATCTACC ACCTCCGGAC GCAAATGTGG CATTTAGCCA AGGTAAAGTG GATGCTTGGT TTATTTGGGA ACCATTTGTG ACTAGAAATG TACAACAGAA GGTTGGCAGA GTTTTAACAG ATGGTGGTAA TGGTTTACGG GATACTAACA ACTATGTCTC TACAACCCGT AAGTTTTATC AAGAAAATCC AGAGTTAATC AAAATATTTC TGGAAGAACT GCAAAAAGCC CAAAATTGGG CAAAAAATAA CCCCAAAGAA CTGGCTAACT TACTTGCTCA AACTACTCAA CTTGACCCGC CTACATTAGA AATTATGCAC AGTAAGTATG ATTTCACACT CATACCAATT ACTGAACAAA TTATTAACAA ACAGCAGGAA GTTGCTGACA AATGGTACCG TTTAGGGCTG ATACCAAGAA AGGTGAATGT CAGAGATGGC TTTTTAACTC CAGAACAATA TGCGGAAATT ACTCCCCAGG AAGTGCTGGC AAAAAAATAG
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Protein sequence | MSQLIKDFAN ISQAWTSKRT TRRHALFAFG CSLVLSTTLF SCSPSQNNNQ QQASSSASNV ANTNATNKVV RIVRSKQLTA LAVLEQKRIL EERLKPLGYK VEWPEFAAGP QQLEALNTGA LDIASTAESP PIFSQAAGTP LVYLAANSSD GKAVSLLVPA NSNVKSVKDL KGKKIASQKA SIGHYLIVRA VEREGLKLSD IQPVYLPPPD ANVAFSQGKV DAWFIWEPFV TRNVQQKVGR VLTDGGNGLR DTNNYVSTTR KFYQENPELI KIFLEELQKA QNWAKNNPKE LANLLAQTTQ LDPPTLEIMH SKYDFTLIPI TEQIINKQQE VADKWYRLGL IPRKVNVRDG FLTPEQYAEI TPQEVLAKK
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