| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1864 |
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| Symbol | |
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| ID | 4173049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2256483 |
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| End bp | 2257523 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638054873 |
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| Product | putative sulfonate ABC transporter, periplasmic sulfonate-binding protein |
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| Protein accession | YP_661438 |
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| Protein GI | 109898183 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.114682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGG GCGCAGAAAT ACGACGTTTA CTGATATTTA GCTTGGTTGT GATCGTGATG
GCTATGAGTA TGAAAGCCTT TGCACAGACG ACGCCGAACG TGCGCCTGGG GGTGTTGAAA
TACGGCACGG TTAATTGGGA AGTGGATGTA ATTAAACACC ACAAGCTGGA TAAAAAATAC
GGATTCACGT TAGACGTATT ATCTTTGGGC AGTAAAAATG CTTCCGCTGT GGCTTTGCAA
AGTAATGCAG TGGACATCAT TCTAACTGAT TGGCTATGGG TAAATCGCCA ACGCGCTAAC
GATAAAGACA TTACACTTTT CCCCACTTCT ATTGCTACCG GGGGCTTGTA TGTTCCAAAA
GATTCATCTG CTAAGGATGT TCGCGATTTA GCGAATAAAA AAGTCGGTAT TGCTGGTGGC
GAGGTGGATA AAAACTGGTT GTTACTGCAG GCATATGCAA AAGCTCAATA TGGTTTTGAT
ATAAAAAACA AAACCGCGCC GAGTTTTATG TCTCCTGTTC TACTTAACGT CCTTATGCTC
AGAGGCGAGC TTGATGCGGG GATCAACTTT TGGCACTACG GTGCACGCTT AAAAGCCAAA
GGGTATCGAC TATTGGTCAC GGTGCCAGAA ATATTACACG CCCTTCACAT TGAAAACGAT
GTGCCTCTGC TGGGCTGGGC ATTCAAAAAA CCTTGGGCTG ATCAGCATGC GAAGAGCATC
AAAGGTTTCT TGCGAGCATC ACTGGCCGCA AAGCAAATTC TTTACTCATC AGATGATGAA
TGGGCGCGAA TTCGCCATTT AACTAAAGCT GAAAATGATG AGGTGTTTAC GGGGTTACAA
ACCGAATATC GAAGGGGCTT GTTGCATCGA TTTGGTCCTG AGGAATTAAT GGCAACGAAA
GACATATTTA CTGTGTTGGC GGAGCATGGT GGACACAACT TGGTAGGCAA TGCCACATCC
CTAGATGAGC ATACGTTCTA TGCGTTTGAC CAGCGTTTAT TGACCTGGCA CCCTGTGGTT
GAAGATGAAA GCGCTCAATG A
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| Protein sequence | MFKGAEIRRL LIFSLVVIVM AMSMKAFAQT TPNVRLGVLK YGTVNWEVDV IKHHKLDKKY
GFTLDVLSLG SKNASAVALQ SNAVDIILTD WLWVNRQRAN DKDITLFPTS IATGGLYVPK
DSSAKDVRDL ANKKVGIAGG EVDKNWLLLQ AYAKAQYGFD IKNKTAPSFM SPVLLNVLML
RGELDAGINF WHYGARLKAK GYRLLVTVPE ILHALHIEND VPLLGWAFKK PWADQHAKSI
KGFLRASLAA KQILYSSDDE WARIRHLTKA ENDEVFTGLQ TEYRRGLLHR FGPEELMATK
DIFTVLAEHG GHNLVGNATS LDEHTFYAFD QRLLTWHPVV EDESAQ
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