Gene Mnod_5973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_5973 
Symbol 
ID7305333 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011894 
Strand+ 
Start bp6078318 
End bp6079292 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content74% 
IMG OID643603596 
Productputative ABC transporter periplasmic solute-binding protein 
Protein accessionYP_002501103 
Protein GI220925801 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0249466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCAC GGCGCGGGTT ACTGGCGGCG GCCGCCCTCT GGCCGCTGCC GCTCGGCGCA 
AGGGAGGCGA GCGTCCTCAG GGTCGGCGTC CTGCCCTTCG GCACCGTCTC GTGGGAGGCG 
GCGGTGATCA AGGAGCGCCG GCTCGACGCG GCGCAGGGCT TCTCGCTGGA GAGCCTGCGG 
CTGGCCGGCA ACGACGCCGC CCGCATCGCC TTCCAGGGCG ACCAGGTCGA CACCATCGTG 
TCGGACCTGC TCTGGGCGGC GCGCCTGCGG GCCGAGGGCA AGCCGGTGAA GTTCCTGCCC 
TATTCCTCCA CCGAGGGCGC CCTGATGGTG GCGGGCGACA GCCCGATCCG CACCGTCGCC 
GACCTCGCGG GCAAGCGGCT CGGCGTGGCG GGCGGGGCGC TCGACAAGAA CTGGCTCCTC 
CTCAAGGCCC GCGCCCAGAA GCAGGACGGG CTCGACCTCG AACGGGCCGC CCGCCCGGCC 
TTCGGCGCGC CGCCGCTCCT GATGCAGAAG CTGGAGGCGG GCGAACTCGA CGCGGCGCTC 
CTCTACTGGA CCTTCTGCGC GCGGCTCGAG GCCAGAGGCT TCCGGCGCCT GATCGGCGCG 
GACGAGATCG CCCGGTCCTT CGGGGTGGAG GGGCCGATCG CGCTCCTCGG CTACGTGTTC 
GACGAGGCGC TGCTGCAGCG CAAACCCGCC GCGATGGCGG CCTTCGCCCG CGCCTCGCGG 
CAGGCCAAGC AGGCGCTGGT GTCGGACGAG GGGGCCTGGA GCAGCGTGCG CCCCCTGATG 
GCGGCGGAGG ACGAGCCGAC CTTCGCGGCC CTCAAGCGCG AGTTCCTCGC CGGCATCCCG 
CGCCGGGGGA TCGCCGCCGA GCGGGCCGAT GCGGAGCGCC TCTACGCGGT GCTGGCGCGC 
CTCGGCGGCG AGCGGCTGGT CGGCAGCGCC ACGACCCTGC CGGAGGGCCT GTATTGGGAT 
GTCCCCAATG GCTGA
 
Protein sequence
MLSRRGLLAA AALWPLPLGA REASVLRVGV LPFGTVSWEA AVIKERRLDA AQGFSLESLR 
LAGNDAARIA FQGDQVDTIV SDLLWAARLR AEGKPVKFLP YSSTEGALMV AGDSPIRTVA 
DLAGKRLGVA GGALDKNWLL LKARAQKQDG LDLERAARPA FGAPPLLMQK LEAGELDAAL 
LYWTFCARLE ARGFRRLIGA DEIARSFGVE GPIALLGYVF DEALLQRKPA AMAAFARASR 
QAKQALVSDE GAWSSVRPLM AAEDEPTFAA LKREFLAGIP RRGIAAERAD AERLYAVLAR 
LGGERLVGSA TTLPEGLYWD VPNG