17 homologs were found in PanDaTox collection
for query gene Smed_3935 on replicon NC_009620
Organism: Sinorhizobium medicae WSM419



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009620  Smed_3935  putative ABC transporter periplasmic solute-binding protein  100 
 
 		 327 aa  661    Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2671  hypothetical protein  65.37 
 
 		 323 aa  408  1e-113  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.25613  normal  1 
 
 
-
 
NC_008686  Pden_2355  putative ABC transporter periplasmic solute-binding protein  57 
 
 		 329 aa  344  1e-93  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2852  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  44.63 
 
 		 329 aa  242  5e-63  Thauera sp. MZ1T  Bacteria  normal  0.174204  n/a   
 
 
-
 
NC_003910  CPS_1928  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  39.01 
 
 		 332 aa  240  2e-62  Colwellia psychrerythraea 34H  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_009720  Xaut_1785  putative ABC transporter periplasmic solute-binding protein  39.81 
 
 		 341 aa  236  5.0000000000000005e-61  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.388953 
 
 
-
 
NC_008228  Patl_1864  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  39.75 
 
 		 346 aa  234  1.0000000000000001e-60  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.114682  n/a   
 
 
-
 
NC_010511  M446_5748  putative ABC transporter periplasmic solute-binding protein  42.86 
 
 		 324 aa  229  5e-59  Methylobacterium sp. 4-46  Bacteria  normal  0.267021  normal  0.0239802 
 
 
-
 
NC_011894  Mnod_5973  putative ABC transporter periplasmic solute-binding protein  42.14 
 
 		 324 aa  229  6e-59  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0249466  n/a   
 
 
-
 
NC_010505  Mrad2831_2777  putative ABC transporter periplasmic solute-binding protein  42.09 
 
 		 326 aa  216  2.9999999999999998e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0641341 
 
 
-
 
NC_009485  BBta_5955  putative ABC transporter (substrate-binding protein)  36.51 
 
 		 331 aa  206  6e-52  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.764168  normal  0.119821 
 
 
-
 
NC_011666  Msil_0012  ABC transporter substrate-binding protein  36.59 
 
 		 351 aa  204  2e-51  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_010172  Mext_1806  putative ABC transporter periplasmic solute-binding protein  39.32 
 
 		 331 aa  190  2e-47  Methylobacterium extorquens PA1  Bacteria  normal  0.592526  normal  0.965356 
 
 
-
 
NC_011757  Mchl_2142  putative ABC transporter periplasmic solute-binding protein  39.32 
 
 		 331 aa  190  2e-47  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.297347  normal  0.343222 
 
 
-
 
NC_010725  Mpop_1758  putative ABC transporter periplasmic solute-binding protein  38.31 
 
 		 331 aa  189  8e-47  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013745  Htur_4594  putative ABC transporter periplasmic solute- binding protein  31.05 
 
 		 328 aa  126  7e-28  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.751076  n/a   
 
 
-
 
NC_013922  Nmag_2350  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  29.64 
 
 		 367 aa  122  9.999999999999999e-27  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
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