31 homologs were found in PanDaTox collection
for query gene CPS_1928 on replicon NC_003910
Organism: Colwellia psychrerythraea 34H



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_003910  CPS_1928  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  100 
 
 		 332 aa  681    Colwellia psychrerythraea 34H  Bacteria  normal  0.0176064  n/a   
 
 
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NC_008228  Patl_1864  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  60.06 
 
 		 346 aa  400  9.999999999999999e-111  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.114682  n/a   
 
 
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NC_011662  Tmz1t_2852  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  47.67 
 
 		 329 aa  289  4e-77  Thauera sp. MZ1T  Bacteria  normal  0.174204  n/a   
 
 
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NC_009952  Dshi_2671  hypothetical protein  43.22 
 
 		 323 aa  270  4e-71  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.25613  normal  1 
 
 
-
 
NC_009485  BBta_5955  putative ABC transporter (substrate-binding protein)  41.36 
 
 		 331 aa  259  6e-68  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.764168  normal  0.119821 
 
 
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NC_010511  M446_5748  putative ABC transporter periplasmic solute-binding protein  44.22 
 
 		 324 aa  251  1e-65  Methylobacterium sp. 4-46  Bacteria  normal  0.267021  normal  0.0239802 
 
 
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NC_011894  Mnod_5973  putative ABC transporter periplasmic solute-binding protein  43.54 
 
 		 324 aa  248  7e-65  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0249466  n/a   
 
 
-
 
NC_008686  Pden_2355  putative ABC transporter periplasmic solute-binding protein  40.88 
 
 		 329 aa  241  9e-63  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_3935  putative ABC transporter periplasmic solute-binding protein  39.01 
 
 		 327 aa  240  2e-62  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011666  Msil_0012  ABC transporter substrate-binding protein  39.17 
 
 		 351 aa  226  4e-58  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009720  Xaut_1785  putative ABC transporter periplasmic solute-binding protein  37.95 
 
 		 341 aa  217  2e-55  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.388953 
 
 
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NC_010505  Mrad2831_2777  putative ABC transporter periplasmic solute-binding protein  39.2 
 
 		 326 aa  215  7e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0641341 
 
 
-
 
NC_010725  Mpop_1758  putative ABC transporter periplasmic solute-binding protein  34.4 
 
 		 331 aa  177  3e-43  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011757  Mchl_2142  putative ABC transporter periplasmic solute-binding protein  34.15 
 
 		 331 aa  176  6e-43  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.297347  normal  0.343222 
 
 
-
 
NC_010172  Mext_1806  putative ABC transporter periplasmic solute-binding protein  34.15 
 
 		 331 aa  176  6e-43  Methylobacterium extorquens PA1  Bacteria  normal  0.592526  normal  0.965356 
 
 
-
 
NC_013922  Nmag_2350  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  23.31 
 
 		 367 aa  90.1  5e-17  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013745  Htur_4594  putative ABC transporter periplasmic solute- binding protein  23.13 
 
 		 328 aa  88.6  1e-16  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.751076  n/a   
 
 
-
 
NC_009720  Xaut_4052  NMT1/THI5-like domain-containing protein  27.54 
 
 		 354 aa  51.2  0.00002  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.577447 
 
 
-
 
NC_007492  Pfl01_3161  nitrate ABC transporter, periplasmic nitrate-binding protein, putative  25.17 
 
 		 467 aa  50.1  0.00006  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.230597  normal  1 
 
 
-
 
NC_010501  PputW619_5011  putative sulfonate transport system substrate-binding protein  23.84 
 
 		 468 aa  47.8  0.0003  Pseudomonas putida W619  Bacteria  normal  1  normal  1 
 
 
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NC_002947  PP_0207  nitrate ABC transporter, periplasmic nitrate-binding protein, putative  23.84 
 
 		 468 aa  47.8  0.0003  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.497934 
 
 
-
 
NC_013595  Sros_1820  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  26.67 
 
 		 327 aa  47  0.0005  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.246405 
 
 
-
 
NC_010084  Bmul_1296  nitrate ABC transporter, periplasmic nitrate-binding protein, putative  23.49 
 
 		 474 aa  46.6  0.0006  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.232575  normal  0.301895 
 
 
-
 
NC_011830  Dhaf_3641  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  26.39 
 
 		 333 aa  46.2  0.0008  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00000105087  n/a   
 
 
-
 
NC_010725  Mpop_1212  NMT1/THI5 like domain protein  24.11 
 
 		 326 aa  45.8  0.0009  Methylobacterium populi BJ001  Bacteria  normal  0.0153956  normal  0.631224 
 
 
-
 
NC_010465  YPK_1958  ABC transporter, periplasmic substrate-binding protein  26.67 
 
 		 343 aa  45.8  0.001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_1849  ABC transporter, periplasmic substrate-binding protein  26.67 
 
 		 343 aa  44.7  0.003  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010084  Bmul_0419  taurine ABC transporter, periplasmic binding protein  28 
 
 		 338 aa  43.1  0.007  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  0.402679 
 
 
-
 
NC_010625  Bphy_6202  NMT1/THI5-like domain-containing protein  20.66 
 
 		 339 aa  42.7  0.008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.288537 
 
 
-
 
NC_007951  Bxe_A4209  ABC taurine transporter, periplasmic ligand binding protein  26.85 
 
 		 340 aa  42.7  0.008  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.494827 
 
 
-
 
NC_010508  Bcenmc03_1998  nitrate ABC transporter, periplasmic nitrate-binding protein, putative  22.97 
 
 		 474 aa  42.4  0.01  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.420561  normal  1 
 
 
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