Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5955 |
Symbol | |
ID | 5152439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6168744 |
End bp | 6169739 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640560678 |
Product | putative ABC transporter (substrate-binding protein) |
Protein accession | YP_001241800 |
Protein GI | 148257215 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.764168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.119821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGGA TCAGTCATTT CCAGATCAGT CATTTGTTGA TCGCATTACT TGCCTGCGTC GGGCTGCCGG TCTCCGCGGG CTGCGCCACT GAGACCGTCA AGGTTGCAGT GCAAAAGACC GGAACCTTTG CCTGGGAACT GGCCGTCATC CGAGCCCATC AACTGGACAA GCAGGCCGAC ATTTCGATCG ATGCCGTCGA GCTCGCAAGT CCCGAAGCCG GCAAGATCGC GCTACGCGCC GGCAATGCCG ATATCATGGT ATCGGACTGG TTATGGGTGT CACGCGAGCG TGCGCTCGGC GCGAAGCTGA CCTTCACGCC CTATTCGAGT GCGCTCGGCG CCGTGATGGT CCCGGCAAAC TCGCCGATCA AGACGTTGTC CGATCTCAAG GGGCGCAAGC TGGCGGTGGC CGGCGGTCCG CTCGACAAGA GCTGGCTGTT GCTGCAGGCC TCACTCAAGC GTGATGGGAT CGATCTGAAG TCGCAGGCCA CGATCAGCTA TGGCGCGCCG CCGCTGCTGG CCGCCAAACT GGCGGACGGC GAGATGGATG CGGGCTTGAA CTACTGGAAT TTCTGCGCGG CGCTGGAAGC CAAGGGCTTC CGCCGTCTGA CCGGCGTCGA GGATCTCCTG GCTCCGTTCG GCGCCAAGGG CCGCACGGCC ATGATCGGCT ACGTTTTTGA CGAGGACTGG GCCGGCAAGC ATCGCGATCT CGTGGCCCGC TTCCTCTCTG TCACCGCCAA GGCCAAGGAG ATCCTGGCGG CGTCCGATGC CGAGTGGCAG ACGATCGCAC CGTTGACCGG CGCGCCTGAC GACGCCACCT TGCGGGTCTA TCGCGACCGC TACCGCGAAG GCATTCCACG CCGCCCCGTG GCCGAGGAAG AGGCCGACGC CCGCATCCTC TATGGGGTGC TCGCCGCGAT CGGCGGACGC GATCTGGTCG GCCCTTCGCC CGAGCTCAGT CCCGGCACCT ACTACAGGGC GGATGCGAGG GATTAG
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Protein sequence | MRRISHFQIS HLLIALLACV GLPVSAGCAT ETVKVAVQKT GTFAWELAVI RAHQLDKQAD ISIDAVELAS PEAGKIALRA GNADIMVSDW LWVSRERALG AKLTFTPYSS ALGAVMVPAN SPIKTLSDLK GRKLAVAGGP LDKSWLLLQA SLKRDGIDLK SQATISYGAP PLLAAKLADG EMDAGLNYWN FCAALEAKGF RRLTGVEDLL APFGAKGRTA MIGYVFDEDW AGKHRDLVAR FLSVTAKAKE ILAASDAEWQ TIAPLTGAPD DATLRVYRDR YREGIPRRPV AEEEADARIL YGVLAAIGGR DLVGPSPELS PGTYYRADAR D
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