Gene BBta_5955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5955 
Symbol 
ID5152439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6168744 
End bp6169739 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content65% 
IMG OID640560678 
Productputative ABC transporter (substrate-binding protein) 
Protein accessionYP_001241800 
Protein GI148257215 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.764168 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.119821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGCGGA TCAGTCATTT CCAGATCAGT CATTTGTTGA TCGCATTACT TGCCTGCGTC 
GGGCTGCCGG TCTCCGCGGG CTGCGCCACT GAGACCGTCA AGGTTGCAGT GCAAAAGACC
GGAACCTTTG CCTGGGAACT GGCCGTCATC CGAGCCCATC AACTGGACAA GCAGGCCGAC
ATTTCGATCG ATGCCGTCGA GCTCGCAAGT CCCGAAGCCG GCAAGATCGC GCTACGCGCC
GGCAATGCCG ATATCATGGT ATCGGACTGG TTATGGGTGT CACGCGAGCG TGCGCTCGGC
GCGAAGCTGA CCTTCACGCC CTATTCGAGT GCGCTCGGCG CCGTGATGGT CCCGGCAAAC
TCGCCGATCA AGACGTTGTC CGATCTCAAG GGGCGCAAGC TGGCGGTGGC CGGCGGTCCG
CTCGACAAGA GCTGGCTGTT GCTGCAGGCC TCACTCAAGC GTGATGGGAT CGATCTGAAG
TCGCAGGCCA CGATCAGCTA TGGCGCGCCG CCGCTGCTGG CCGCCAAACT GGCGGACGGC
GAGATGGATG CGGGCTTGAA CTACTGGAAT TTCTGCGCGG CGCTGGAAGC CAAGGGCTTC
CGCCGTCTGA CCGGCGTCGA GGATCTCCTG GCTCCGTTCG GCGCCAAGGG CCGCACGGCC
ATGATCGGCT ACGTTTTTGA CGAGGACTGG GCCGGCAAGC ATCGCGATCT CGTGGCCCGC
TTCCTCTCTG TCACCGCCAA GGCCAAGGAG ATCCTGGCGG CGTCCGATGC CGAGTGGCAG
ACGATCGCAC CGTTGACCGG CGCGCCTGAC GACGCCACCT TGCGGGTCTA TCGCGACCGC
TACCGCGAAG GCATTCCACG CCGCCCCGTG GCCGAGGAAG AGGCCGACGC CCGCATCCTC
TATGGGGTGC TCGCCGCGAT CGGCGGACGC GATCTGGTCG GCCCTTCGCC CGAGCTCAGT
CCCGGCACCT ACTACAGGGC GGATGCGAGG GATTAG
 
Protein sequence
MRRISHFQIS HLLIALLACV GLPVSAGCAT ETVKVAVQKT GTFAWELAVI RAHQLDKQAD 
ISIDAVELAS PEAGKIALRA GNADIMVSDW LWVSRERALG AKLTFTPYSS ALGAVMVPAN
SPIKTLSDLK GRKLAVAGGP LDKSWLLLQA SLKRDGIDLK SQATISYGAP PLLAAKLADG
EMDAGLNYWN FCAALEAKGF RRLTGVEDLL APFGAKGRTA MIGYVFDEDW AGKHRDLVAR
FLSVTAKAKE ILAASDAEWQ TIAPLTGAPD DATLRVYRDR YREGIPRRPV AEEEADARIL
YGVLAAIGGR DLVGPSPELS PGTYYRADAR D