Gene Xaut_1785 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1785 
Symbol 
ID5421919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2012110 
End bp2013135 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content74% 
IMG OID640881033 
Productputative ABC transporter periplasmic solute-binding protein 
Protein accessionYP_001416687 
Protein GI154245729 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.388953 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCC GCCGCCGCAT GCTCGCGCTC ACCGCGGGCG TGCTGTCGGG TGCCGCCGTG 
CTCCCGATGC TGCCCGTGCG GGCAGCCACC GGCGCGGCTC CCGTGCTGCG CCTCGGCCTG
CTGCAATTCG GCACCGGGGC GTGGGAGATC GCCGCCATGA CGGCGCTGGG GCTCGATGCG
GCCTACGGCG TCGCCCTCGC CCCGCAGCGC TTCGCCTCCA ATGATGCCGG CCGCATTGCC
TTCCAGGCCG GCGCGGTGGA TGCCTTCCTC TCCGACCTTC TGTGGGCCGC CCGGGTGAAG
GCGGGGGGGC GTGACCTCGT CTACCTGCCC TTCTCCTCCG CCGAGGGCGC GGTGATGGTG
CGCTCTGATT CGCCCCTCAG GACCGTGGCG GATCTCGCCG GCAAGCGGCT GGGGGTGTCG
GGTGGCGCTC TCGACAAGAG CTGGCTGATG CTGAAGGCCC ATGCGCAGGC GCAGGCCGGC
CTCGATCTCC AGACCGCCGC GCAGCCGGTG TTCGCCGCCC CGCCCTTGCT GGCGGCGGAA
CTGGAGCAGG GCAATCTCGA CGCCGCGCTA CTCTACTGGA CCTTCTGCGC ACGGCTCGCG
CCCAAGGGCT TCCGCCCGCT CATCAGCGTG GAGGAACTGG TGCGCGGCTT CGGCGTGCCG
CATGAGCCGA CCCTGGTGGG CTATGTGTTC GACGGCGCCT TCGCCCGCGC CAACCCCCAG
ACCGTGGCCG CCTTTGCCCG CGCCTCCCGC GCCACCAAGG CGGCGCTCGC CGGCGCCGAT
CCGGCTCGGA CGGAGACCGC CTGGGCCGCC GCGCGACGGG AGATGCAGGC GCCGGACGAA
GCTACCTTCG CTGCCCTCAA GGCCGGCTTC ATCGCCGGCG TGCCGCGCCT GTCGCCGGCA
GAGGACGAAG CGGCGGCGGC GCAGCTTTAT GCGGTGCTGG CAAAGCTGGG CGGCGAGCGC
CTGGTGGGGC CGGCGGCCGC CTTGCCGCCC GGCCTCTTCT TCGCGGCGGA GCGGGTGGCG
CCATGA
 
Protein sequence
MLTRRRMLAL TAGVLSGAAV LPMLPVRAAT GAAPVLRLGL LQFGTGAWEI AAMTALGLDA 
AYGVALAPQR FASNDAGRIA FQAGAVDAFL SDLLWAARVK AGGRDLVYLP FSSAEGAVMV
RSDSPLRTVA DLAGKRLGVS GGALDKSWLM LKAHAQAQAG LDLQTAAQPV FAAPPLLAAE
LEQGNLDAAL LYWTFCARLA PKGFRPLISV EELVRGFGVP HEPTLVGYVF DGAFARANPQ
TVAAFARASR ATKAALAGAD PARTETAWAA ARREMQAPDE ATFAALKAGF IAGVPRLSPA
EDEAAAAQLY AVLAKLGGER LVGPAAALPP GLFFAAERVA P