39 homologs were found in PanDaTox collection
for query gene Mext_1806 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011757  Mchl_2142  putative ABC transporter periplasmic solute-binding protein  99.7 
 
 		 331 aa  644    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.297347  normal  0.343222 
 
 
-
 
NC_010172  Mext_1806  putative ABC transporter periplasmic solute-binding protein  100 
 
 		 331 aa  647    Methylobacterium extorquens PA1  Bacteria  normal  0.592526  normal  0.965356 
 
 
-
 
NC_010725  Mpop_1758  putative ABC transporter periplasmic solute-binding protein  95.17 
 
 		 331 aa  576  1.0000000000000001e-163  Methylobacterium populi BJ001  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010505  Mrad2831_2777  putative ABC transporter periplasmic solute-binding protein  66.67 
 
 		 326 aa  391  1e-108  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0641341 
 
 
-
 
NC_010511  M446_5748  putative ABC transporter periplasmic solute-binding protein  62.69 
 
 		 324 aa  377  1e-103  Methylobacterium sp. 4-46  Bacteria  normal  0.267021  normal  0.0239802 
 
 
-
 
NC_011894  Mnod_5973  putative ABC transporter periplasmic solute-binding protein  61.04 
 
 		 324 aa  355  5e-97  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.0249466  n/a   
 
 
-
 
NC_009720  Xaut_1785  putative ABC transporter periplasmic solute-binding protein  48.81 
 
 		 341 aa  281  7.000000000000001e-75  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  0.388953 
 
 
-
 
NC_009485  BBta_5955  putative ABC transporter (substrate-binding protein)  42.54 
 
 		 331 aa  246  6e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.764168  normal  0.119821 
 
 
-
 
NC_008686  Pden_2355  putative ABC transporter periplasmic solute-binding protein  41.97 
 
 		 329 aa  238  1e-61  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_2671  hypothetical protein  40.68 
 
 		 323 aa  226  5.0000000000000005e-58  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.25613  normal  1 
 
 
-
 
NC_011666  Msil_0012  ABC transporter substrate-binding protein  38.6 
 
 		 351 aa  221  9e-57  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_009620  Smed_3935  putative ABC transporter periplasmic solute-binding protein  37.81 
 
 		 327 aa  205  8e-52  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011662  Tmz1t_2852  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  37.62 
 
 		 329 aa  187  3e-46  Thauera sp. MZ1T  Bacteria  normal  0.174204  n/a   
 
 
-
 
NC_008228  Patl_1864  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  32.7 
 
 		 346 aa  186  4e-46  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.114682  n/a   
 
 
-
 
NC_003910  CPS_1928  putative sulfonate ABC transporter, periplasmic sulfonate-binding protein  34.15 
 
 		 332 aa  186  6e-46  Colwellia psychrerythraea 34H  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_013922  Nmag_2350  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  33.22 
 
 		 367 aa  123  4e-27  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_013745  Htur_4594  putative ABC transporter periplasmic solute- binding protein  31.29 
 
 		 328 aa  102  1e-20  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.751076  n/a   
 
 
-
 
NC_009253  Dred_2782  NLPA lipoprotein  23.81 
 
 		 319 aa  57  0.0000004  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0743027  n/a   
 
 
-
 
NC_007644  Moth_1973  NLPA lipoprotein  28.36 
 
 		 335 aa  54.3  0.000003  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.000000000524772  normal  1 
 
 
-
 
NC_012560  Avin_30510  ABC transporter periplasmic aliphatic sulfonate-binding protein  26.83 
 
 		 320 aa  52  0.00002  Azotobacter vinelandii DJ  Bacteria  normal  0.846388  n/a   
 
 
-
 
NC_010501  PputW619_4975  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  25.33 
 
 		 321 aa  51.6  0.00002  Pseudomonas putida W619  Bacteria  decreased coverage  0.000230006  hitchhiker  0.00807974 
 
 
-
 
NC_007908  Rfer_1029  extracellular solute-binding protein  28.65 
 
 		 265 aa  51.6  0.00002  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0000261026  n/a   
 
 
-
 
NC_013440  Hoch_3202  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  32.53 
 
 		 346 aa  51.2  0.00003  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  0.0579972 
 
 
-
 
NC_007492  Pfl01_5414  ABC transporter, substrate-binding protein, aliphatic sulphonates  25.17 
 
 		 326 aa  50.8  0.00003  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.445951  hitchhiker  0.00207004 
 
 
-
 
NC_010322  PputGB1_0261  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  25 
 
 		 321 aa  50.1  0.00005  Pseudomonas putida GB-1  Bacteria  normal  0.766816  normal  1 
 
 
-
 
NC_002947  PP_0237  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  27.84 
 
 		 321 aa  48.9  0.0001  Pseudomonas putida KT2440  Bacteria  normal  1  hitchhiker  0.00268504 
 
 
-
 
NC_009512  Pput_0252  aliphatic sulfonate ABC transporter periplasmic ligand-binding protein  27.84 
 
 		 321 aa  48.9  0.0001  Pseudomonas putida F1  Bacteria  normal  0.0269114  normal  0.27021 
 
 
-
 
NC_008554  Sfum_3163  extracellular solute-binding protein  31.36 
 
 		 295 aa  47.4  0.0003  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.180854  normal  1 
 
 
-
 
NC_004578  PSPTO_5316  sulfonate ABC transporter, periplasmic sulfonate-binding protein, putative  25.09 
 
 		 321 aa  46.6  0.0006  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_4876  ABC transporter, substrate-binding protein, aliphatic sulphonates  24.44 
 
 		 321 aa  46.2  0.0007  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011368  Rleg2_5578  taurine ABC transporter, periplasmic binding protein  26.96 
 
 		 337 aa  44.7  0.002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.820848  normal  1 
 
 
-
 
NC_007413  Ava_4066  ABC transporter, substrate-binding protein, aliphatic sulphonates  28.57 
 
 		 356 aa  45.1  0.002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.559001 
 
 
-
 
NC_010681  Bphyt_0507  taurine ABC transporter, periplasmic binding protein  25.64 
 
 		 340 aa  43.9  0.003  Burkholderia phytofirmans PsJN  Bacteria  normal  1  normal  0.058111 
 
 
-
 
NC_007951  Bxe_A4209  ABC taurine transporter, periplasmic ligand binding protein  25.64 
 
 		 340 aa  44.3  0.003  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  0.494827 
 
 
-
 
NC_002950  PG1379  ABC transporter, periplasmic substrate-binding protein, putative  22.57 
 
 		 312 aa  44.3  0.003  Porphyromonas gingivalis W83  Bacteria  n/a    normal  0.0275994 
 
 
-
 
NC_012850  Rleg_4368  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  27.41 
 
 		 317 aa  44.3  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  normal  0.178631 
 
 
-
 
NC_008541  Arth_3083  ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein  26.24 
 
 		 328 aa  43.5  0.005  Arthrobacter sp. FB24  Bacteria  normal  0.261971  n/a   
 
 
-
 
NC_009485  BBta_1367  aliphatic sulfonate ABC transporter periplasmic solute-binding protein  28.87 
 
 		 368 aa  43.5  0.005  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.0520696 
 
 
-
 
NC_010725  Mpop_3602  aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein  30.17 
 
 		 324 aa  43.1  0.007  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.520581 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>