| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3161 |
|---|
| Symbol | |
|---|
| ID | 3712921 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3629303 |
|---|
| End bp | 3630706 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | nitrate ABC transporter, periplasmic nitrate-binding protein, putative |
|---|
| Protein accession | YP_348890 |
|---|
| Protein GI | 77459383 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.230597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCGTG CAGCAATCGC CGGTCTGGTA CTGGCTTCGT TCACCCTGTC GGCCTCCGCC
GAAACCATCC GCATCGCCAT CGGCACCCAG GACACCACCA TCAATTGCGC CGCCGGCGGC
CTATTGATTC GCGAACTGGG CCTGCTCGAC AAATACCTGC CTCACGACGG CGCCTACAAG
GACGCCAGGT ACGATGTGCA ATGGAAGAAC TTCACCAGCG GCGCACCACT GACCAACGAG
ATGGTCGCCG GCAAACTCGA CTTCGGCGCC ATGGCCGATT TCCCCGGTGC GTTCAACGGC
GTGGCGTTTG AAACCGCCGG CAAACACAGT CTGTTCATCA GCGTGCTGTC GGGCAGCATC
AAGGGCAGCG GCAACGGCAT CGTGGTGCCG AGCGCGTCTG GCGTGCAGTC GTTGAGCGAA
CTCAAGGGCA AGACCATCTC CGTGCCGTTC GCCTCCACCG CCCACGGCAT GTTGCTGCGC
GCCGTGGCGG AGCAGGGCTG GGATCCGCTC AAGGACGTGA ACATCATCGC CCAGCCGCCA
GAGGTCGCAG GCTCCGCGTT GCAGGCCGGC AAAATCGACG CCCACGCCGA CTTCGTACCG
TTTGCCGAAC TGTTCCCGAG CCGCGGCTTC GCCCGCAAGA TCTACGACGG CGCCCAGGCC
AATGCACCGA CGTTCCACGG TGCGCTGGTC GATCAGGCCT ACGCCAGGAA GTACCCGGAA
ATCGTCGTCG CCTACCTGCG CGCGAGCATC GAGGCCAATC AACTGCTGGC CGCCGAACCG
GAGAAATACA GCGAACTGAT CGCCAAGGTC ACTGGCGTAG ATGCTGAGGT CAACTACCTG
TTCCACGGTC CGCTGGGCGT GCAGACCCGC GACCTGAGCT GGAAACCGGA ATATCGCCAG
GCCGTAGGCA CCGCCATCGA CACGCTGAAG CTGCTGAAGA AGGCCGATCG CGGACTCGAT
CTGAATACCT TTATCGACGA TCAGTACATC CGTGCGGCGT TCAAGGCTTC GAATCTGGAT
TACACGGCGC AACTGGCCAA CTACGCGCAG ACGCCGTTGA AGTCGCAGGA TGCATTGACC
GGCAAAGCGA TCACCGACTT CAGCCATGTC GCGGAAATCT GGGTGCGCGG TGAGGACAAG
GTCCGGCGTT ATGCCTCGGC TGAAGAGGCG TTCACGGCGC TGGCCGGCCT GAAATCGGAA
GGCAAGAACA TCCGTGCGGT GTATGCCCAG GCGAGTGACA GCGGGATCAA GTTGCTGGCG
GAGCAGGCGT GGTTTGCCAG TGATGCGAAG GGGCGGCTCA GCGCGTTTTT GCTCAAGGGG
CAGGCGCAGC AATTTGCCAC GGCTCAGGGC GGCAAAGTCC TCGACTTTAC CGACGCTACC
ACCCAGGCCG TGGCCACCCG CTAA
|
|---|
| Protein sequence | MLRAAIAGLV LASFTLSASA ETIRIAIGTQ DTTINCAAGG LLIRELGLLD KYLPHDGAYK
DARYDVQWKN FTSGAPLTNE MVAGKLDFGA MADFPGAFNG VAFETAGKHS LFISVLSGSI
KGSGNGIVVP SASGVQSLSE LKGKTISVPF ASTAHGMLLR AVAEQGWDPL KDVNIIAQPP
EVAGSALQAG KIDAHADFVP FAELFPSRGF ARKIYDGAQA NAPTFHGALV DQAYARKYPE
IVVAYLRASI EANQLLAAEP EKYSELIAKV TGVDAEVNYL FHGPLGVQTR DLSWKPEYRQ
AVGTAIDTLK LLKKADRGLD LNTFIDDQYI RAAFKASNLD YTAQLANYAQ TPLKSQDALT
GKAITDFSHV AEIWVRGEDK VRRYASAEEA FTALAGLKSE GKNIRAVYAQ ASDSGIKLLA
EQAWFASDAK GRLSAFLLKG QAQQFATAQG GKVLDFTDAT TQAVATR
|
|---|
| |