Gene Sros_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_1820 
Symbol 
ID8665098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp1942323 
End bp1943306 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content66% 
IMG OID 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein 
Protein accessionYP_003337552 
Protein GI271963356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.246405 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTCA GACTTGCGGG CCGGGCGGTC GTCGCAGGGC TCGCCGCCGT GCTGACCCTG 
AGCGCCTGTG GTGGTTCGGA CGCCAAGACC GACACCGCCA ACGCGAGCGG GCTTGAGAAG
ACCAAGATCA CGATTGGCGC GCTGCCCATC CCCGACTCGG CCGCGCTCTA CATCGCCAAC
AAGAGGGGCT TCTTCCAGAA AGAGGGCCTG ACGGTCGACA TCCAGGTGGT CCAGGGTGGC
GCCCAGGCGC AGCAGTCCCT GTTCGGCGGC TCCCTCGACG CCACGCAGAC CAACTACGTC
TCCACCTTCC TGGCCACGGC GGCCGGCAAC AAGCCGAAGA TCATCTCTGA CCTCTACCAG
GCGACCCCGA ACTCCTTCAA CCTCATGGTG GCCAAGGACT CCTCGATCAA GACCCCGGCC
GACCTGAAGG GCAAGAAGAT CGCGGTCAAC AGCCTCAGGA ACATCGGCAC CCTGTCGGTG
ACCTCCGTGC TCAAGACGCA CGGACTGACC GACAAGGACG TCGAGTTCCT GGAGTTCCCC
TTCCCCGACA TGGCCGGCAA GCTGGAGCAG GGCGTGGTCG ACGCGGCCTG GATGACCGAG
CCGCACCTGA CCGCGGTCCA GAAGAACATC GGCGCCCAGA AGCTCGCCGA CACCATGGTC
GACTCGACCG CCGACTTCCC CATCGCCGGC GTGATCGTCA CCGAGGACTT CGCCGCCAAG
AACCCCAAGA CCGTCGCCGC CTTCCAGCGC GCGGTCGCCG AGGCCCAGAA GATCTCCGCC
GCCGACCGCA AGGCCGTCGA GGAGATCCTG CCGACCTACA CCAAGGGGAT CGACGCGGCC
ACCGCCGCCG TCATCACGCT CGGCACCTTC CCCACCAGCC TTGACGCCAC CCGCCTGCAG
CGGGTGGCCG ACCTGATGCT CGAGCAGGGC CTGCTGAAGA GCAAGATCGA GGCCAAGTCC
CTCCTCCTCG GAAACTCCGG GTGA
 
Protein sequence
MRFRLAGRAV VAGLAAVLTL SACGGSDAKT DTANASGLEK TKITIGALPI PDSAALYIAN 
KRGFFQKEGL TVDIQVVQGG AQAQQSLFGG SLDATQTNYV STFLATAAGN KPKIISDLYQ
ATPNSFNLMV AKDSSIKTPA DLKGKKIAVN SLRNIGTLSV TSVLKTHGLT DKDVEFLEFP
FPDMAGKLEQ GVVDAAWMTE PHLTAVQKNI GAQKLADTMV DSTADFPIAG VIVTEDFAAK
NPKTVAAFQR AVAEAQKISA ADRKAVEEIL PTYTKGIDAA TAAVITLGTF PTSLDATRLQ
RVADLMLEQG LLKSKIEAKS LLLGNSG