Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc3391 |
Symbol | |
ID | 1222255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 3656031 |
End bp | 3657017 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637239808 |
Product | putative signal peptide protein |
Protein accession | NP_521510 |
Protein GI | 17548108 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTTGCCG CCTGCGTCAT GCTGGCGGCG CCACCGCTGG CCGCCGACAC GCCGACGCAC CTGACACTGA TGGTCAGCGG CACCGCCAAG ATGATCTATC TGCCCGCCAC CCTGGCGCAG CGGCTGGGGT ATTTCCGCGA TGAAGGCCTG GACGTGGAAC TGCTGTCCCA GCCCGCCGGC GTCGACGCCG AGAGCGAGCT GCTGACGGGC TACGCGCAAG GCGTGGTCGG GTTCTACGAC CACACCATCG ATCTGCAGAC CAAGGGCAAG GAAGTCCGCG CCATCGTGGT CTTCAGCCAC GTGCCGGGGG AGGCCGAGGT CGTCTCGACG CGCCTGCCCG CCACGGTGCA ATCGCTGCAC GACCTGCGCG GCCGCACGCT GGGCGTGACC GGACTCGGTT CATCCACCAG CTTCCTGACC CGCCACCTGA TGGCACAACA GGGACTCGGG CCGGGCGAGT ACACGATGCT GCCGGTCGGC GCCGAGCACA GCTTCGTCAG CGCCCTGCGC AGCGGCCGCA TCGACGCCGG CATGACCACC GACCCGACTG CGACCCGACT GATCCGCAAC AAAGAAGCGC GCATGCTGCT CGACCTGCGC ACGATCGAGA GCACGCGCGC GGCGCTGGGC GGTCCGTACC CGGCGGCGTG CCTGTATGTG CAGACGGAGT GGCTGGAGGC CCACCCCGAA CTGGCAACCA AGCTGGCACG CGCCTTCGTC CGCACGCTGC GCTACCTGCG CAGCCACCGT GCGGAAGACA TTGCCGCGCA TATGCCGCCG GAATTCCGGC GCGACCGTCC GGACGTCTAC ATGCAGGCCC TCATCGCTGC GTTGCCCACG TTCAGCGACG ATGGGCGCAT GCCCGCGGAC GGCCCGGCCA CGGTCTTGCG CGTGCTATCG ACCAGCAACC CGAACGCCCG CGACAAGCAC ATCGACCTGT CGCGGACGTA CACCAACCGC TTCGTCGATC AGGCGAAACT GCCCTGA
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Protein sequence | MLAACVMLAA PPLAADTPTH LTLMVSGTAK MIYLPATLAQ RLGYFRDEGL DVELLSQPAG VDAESELLTG YAQGVVGFYD HTIDLQTKGK EVRAIVVFSH VPGEAEVVST RLPATVQSLH DLRGRTLGVT GLGSSTSFLT RHLMAQQGLG PGEYTMLPVG AEHSFVSALR SGRIDAGMTT DPTATRLIRN KEARMLLDLR TIESTRAALG GPYPAACLYV QTEWLEAHPE LATKLARAFV RTLRYLRSHR AEDIAAHMPP EFRRDRPDVY MQALIAALPT FSDDGRMPAD GPATVLRVLS TSNPNARDKH IDLSRTYTNR FVDQAKLP
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