Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3280 |
Symbol | |
ID | 8020964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 3463610 |
End bp | 3464659 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832075 |
Product | putative signal peptide protein |
Protein accession | YP_002983218 |
Protein GI | 241664858 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTTT TTACCTGCAG GAGCGCACGC GCACGCGGCG TCCGGGGCTG GATCACGCCG TGGCTCGCTG CCCTTTTGGC AGTGGCAACT TCGCATGCCC TCGCACAAGA CCCGACGCGC TTGACGCTCA TGGTCAGCGG CACCGCCAAG ATGATCTACC TGCCGGCCAC GCTGGCGCAA CGTCTGGGCT ATTTCCGCGA CGAAGGGCTC GATGTGGAAC TGCTCTCGCA GCCCGCCGGC GTTGATGCGG AAAGCGAACT GCTCACCGGC TTTGCGCAAG GCGTGGTCGG CTTCTATGAC CACACCATCG ACCTCCAGGC CAAGGGCAAG GAAGTGCGCG CCATTGTCGT ATTCAGCCAG GTGCCGGGCG AAGCGGAAGT CGTGTCGACA CGCTTGCCGG CGACGGTGCA GTCGATGCGT GACTTGCGCG GCCGCACGCT GGGCGTGACG GGGCTGGGCG CATCCACGAG CTTTCTCACG CGCTACCTGA TGGTGCAGCA GGGGCTCTCG GCCGGCGACT ACACCATGCT GCCGGTTGGC GCGGAACGCA GTTTCGTCAC TGCGCTGCGC AACGGCCGCA TCGATGCCGG CATGACCACC GACCCGACGG TCTCGCGCCT CTTGCACGGC GGCGAAGCGC GCGTGCTGCT CGACTTGCGT ACGCTCGAGA GCACACGAGC GGCGCTCGGC GGTTCGTACC CGGCCGCGTG CCTGTACCTG CAGACCGCAT GGCTGGAAGC GCATCCGGAC ATCGCTGCCA AACTGGCCCG CGCATTCGTG CGTACCCTGC ATTACCTGCA CACGCATGGT GCAGAAGACA TCGCCGCCCG CATGCCGCCT GAATTCCGGC GCGATCATCC CGAGCTGTAC ACAAGAGCGC TTGCCGCCGC GTTGCCCACC TTCAGCACCG ACGGACGCAT GCCTGACGAC GGCCCACCCA CCGTCCTGCG CGTCCTCGCC GCCAGCAATG CCAACGCGCG CGACAAGCAC ATCGACCTCT CGCGCACCTA CACCAACAGG TTTGTCGATC AGGTGCGCGA GCGCCGCTAG
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Protein sequence | MGVFTCRSAR ARGVRGWITP WLAALLAVAT SHALAQDPTR LTLMVSGTAK MIYLPATLAQ RLGYFRDEGL DVELLSQPAG VDAESELLTG FAQGVVGFYD HTIDLQAKGK EVRAIVVFSQ VPGEAEVVST RLPATVQSMR DLRGRTLGVT GLGASTSFLT RYLMVQQGLS AGDYTMLPVG AERSFVTALR NGRIDAGMTT DPTVSRLLHG GEARVLLDLR TLESTRAALG GSYPAACLYL QTAWLEAHPD IAAKLARAFV RTLHYLHTHG AEDIAARMPP EFRRDHPELY TRALAAALPT FSTDGRMPDD GPPTVLRVLA ASNANARDKH IDLSRTYTNR FVDQVRERR
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