More than 300 homologs were found in PanDaTox collection
for query gene Franean1_3557 on replicon NC_009921
Organism: Frankia sp. EAN1pec



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009921  Franean1_3557  binding-protein-dependent transport systems inner membrane component  100 
 
 
278 aa  533  1e-150  Frankia sp. EAN1pec  Bacteria  normal  0.936822  normal 
 
 
-
 
NC_013739  Cwoe_0578  binding-protein-dependent transport systems inner membrane component  40.45 
 
 
280 aa  150  3e-35  Conexibacter woesei DSM 14684  Bacteria  normal  0.726718  normal 
 
 
-
 
NC_012880  Dd703_0951  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
275 aa  142  6e-33  Dickeya dadantii Ech703  Bacteria  normal  0.24114  n/a   
 
 
-
 
NC_013739  Cwoe_3343  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
290 aa  142  8e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0496107 
 
 
-
 
NC_013159  Svir_16210  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  35.88 
 
 
278 aa  140  1.9999999999999998e-32  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.509076  normal 
 
 
-
 
NC_013739  Cwoe_0132  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
300 aa  140  3e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.765267  normal 
 
 
-
 
NC_011830  Dhaf_0455  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
309 aa  140  3e-32  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_16510  ABC-type dipeptide/oligopeptide/nickel transport system, permease component  37.86 
 
 
321 aa  139  4.999999999999999e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.341434  normal  0.69344 
 
 
-
 
NC_008701  Pisl_0603  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
262 aa  139  4.999999999999999e-32  Pyrobaculum islandicum DSM 4184  Archaea  normal  0.452805  hitchhiker  0.000000299864 
 
 
-
 
NC_011661  Dtur_0860  binding-protein-dependent transport systems inner membrane component  32.82 
 
 
287 aa  139  7e-32  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.000000642732  n/a   
 
 
-
 
NC_009667  Oant_1584  binding-protein-dependent transport systems inner membrane component  34.85 
 
 
302 aa  136  4e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2107  binding-protein-dependent transport systems inner membrane component  42.31 
 
 
284 aa  135  9.999999999999999e-31  Conexibacter woesei DSM 14684  Bacteria  normal  0.0222662  normal 
 
 
-
 
NC_013421  Pecwa_2972  binding-protein-dependent transport systems inner membrane component  33.46 
 
 
301 aa  135  9.999999999999999e-31  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_0613  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
280 aa  135  9.999999999999999e-31  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2651  binding-protein-dependent transport systems inner membrane component  42.53 
 
 
265 aa  134  1.9999999999999998e-30  Salinispora tropica CNB-440  Bacteria  normal  0.0793628  normal  0.307141 
 
 
-
 
NC_010483  TRQ2_1663  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
287 aa  133  3e-30  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1597  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
287 aa  133  3e-30  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0322  putative ABC transport system permease protein  36.02 
 
 
302 aa  133  3e-30  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_2407  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
309 aa  133  3e-30  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_009078  BURPS1106A_A1765  putative glutathione ABC transporter, permease protein  36.02 
 
 
302 aa  133  3e-30  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0374644  n/a   
 
 
-
 
NC_009075  BURPS668_A1850  ABC transporter permease  36.02 
 
 
302 aa  133  3e-30  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3241  binding-protein-dependent transport systems inner membrane component  36.15 
 
 
300 aa  133  3e-30  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009079  BMA10247_A1356  putative dipeptide ABC transporter, permease protein  36.02 
 
 
302 aa  132  3.9999999999999996e-30  Burkholderia mallei NCTC 10247  Bacteria  normal  0.222916  n/a   
 
 
-
 
NC_006349  BMAA0977  putative dipeptide ABC transporter, permease protein  36.02 
 
 
302 aa  132  3.9999999999999996e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.699856  n/a   
 
 
-
 
NC_008784  BMASAVP1_0399  putative dipeptide ABC transporter, permease protein  36.02 
 
 
302 aa  132  3.9999999999999996e-30  Burkholderia mallei SAVP1  Bacteria  normal  0.19947  n/a   
 
 
-
 
NC_008835  BMA10229_0241  putative dipeptide ABC transporter, permease protein  36.02 
 
 
302 aa  132  3.9999999999999996e-30  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0481  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
299 aa  132  5e-30  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.00209608  n/a   
 
 
-
 
NC_011988  Avi_5291  ABC transporter membrane spanning protein (dipeptide)  37.66 
 
 
282 aa  132  6.999999999999999e-30  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA1080  peptide ABC transporter, permease protein  35.25 
 
 
281 aa  132  9e-30  Brucella suis 1330  Bacteria  normal  0.0826305  n/a   
 
 
-
 
NC_009376  Pars_1495  binding-protein-dependent transport systems inner membrane component  35.65 
 
 
263 aa  131  1.0000000000000001e-29  Pyrobaculum arsenaticum DSM 13514  Archaea  normal  normal 
 
 
-
 
NC_003295  RSc1382  transmembrane ABC transporter protein  38.6 
 
 
299 aa  130  2.0000000000000002e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  0.131281  normal 
 
 
-
 
NC_009073  Pcal_0421  binding-protein-dependent transport systems inner membrane component  36 
 
 
262 aa  131  2.0000000000000002e-29  Pyrobaculum calidifontis JCM 11548  Archaea  n/a    normal 
 
 
-
 
NC_013923  Nmag_3650  binding-protein-dependent transport systems inner membrane component  34.76 
 
 
359 aa  130  2.0000000000000002e-29  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_012917  PC1_1493  binding-protein-dependent transport systems inner membrane component  34.27 
 
 
301 aa  130  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_1750  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
274 aa  129  4.0000000000000003e-29  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.120165  normal  0.923474 
 
 
-
 
NC_007494  RSP_3233  ABC peptide transporter, inner membrane subunit  36.36 
 
 
300 aa  129  8.000000000000001e-29  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_3505  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
310 aa  129  8.000000000000001e-29  Dickeya dadantii Ech703  Bacteria  normal  0.361284  n/a   
 
 
-
 
NC_013204  Elen_1222  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
310 aa  128  8.000000000000001e-29  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.0299978 
 
 
-
 
NC_009050  Rsph17029_3971  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
300 aa  129  8.000000000000001e-29  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1924  binding-protein dependent transport system inner membrane protein  37.21 
 
 
303 aa  128  1.0000000000000001e-28  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_3806  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
279 aa  127  1.0000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  0.0684403  hitchhiker  0.00159675 
 
 
-
 
NC_007802  Jann_3818  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
307 aa  127  1.0000000000000001e-28  Jannaschia sp. CCS1  Bacteria  normal  0.327974  normal  0.201863 
 
 
-
 
NC_009800  EcHS_A0890  glutathione ABC transporter, permease protein GsiD  32.44 
 
 
303 aa  127  1.0000000000000001e-28  Escherichia coli HS  Bacteria  normal  0.221253  n/a   
 
 
-
 
NC_009429  Rsph17025_3965  hypothetical protein  34.89 
 
 
300 aa  128  1.0000000000000001e-28  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal  0.16334 
 
 
-
 
NC_013411  GYMC61_1354  binding-protein-dependent transport systems inner membrane component  30.5 
 
 
299 aa  127  1.0000000000000001e-28  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009484  Acry_2076  binding-protein-dependent transport systems inner membrane component  38.17 
 
 
283 aa  127  2.0000000000000002e-28  Acidiphilium cryptum JF-5  Bacteria  normal  0.129382  n/a   
 
 
-
 
NC_009505  BOV_1529  dipeptide ABC transporter, permease protein  33.33 
 
 
302 aa  127  2.0000000000000002e-28  Brucella ovis ATCC 25840  Bacteria  normal  0.936429  n/a   
 
 
-
 
NC_008044  TM1040_1822  binding-protein-dependent transport systems inner membrane component  32.61 
 
 
271 aa  127  2.0000000000000002e-28  Ruegeria sp. TM1040  Bacteria  normal  0.112929  normal  0.720106 
 
 
-
 
NC_008340  Mlg_1084  binding-protein-dependent transport systems inner membrane component  40.65 
 
 
265 aa  127  2.0000000000000002e-28  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0114  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
296 aa  127  2.0000000000000002e-28  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_2589  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
280 aa  127  3e-28  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_007973  Rmet_1410  binding-protein-dependent transport systems inner membrane component  37.67 
 
 
300 aa  126  3e-28  Cupriavidus metallidurans CH34  Bacteria  normal  0.0895579  normal  0.0461956 
 
 
-
 
NC_013757  Gobs_0312  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
313 aa  127  3e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_010511  M446_2849  binding-protein-dependent transport systems inner membrane component  34.81 
 
 
304 aa  126  4.0000000000000003e-28  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6328  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
297 aa  126  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3435  binding-protein-dependent transport systems inner membrane component  36.07 
 
 
287 aa  126  4.0000000000000003e-28  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.185404  normal 
 
 
-
 
NC_010468  EcolC_2812  binding-protein-dependent transport systems inner membrane component  32.44 
 
 
303 aa  125  5e-28  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_2238  binding-protein-dependent transport systems inner membrane component  34.24 
 
 
294 aa  126  5e-28  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.323817 
 
 
-
 
NC_013595  Sros_4850  binding-protein-dependent transport systems inner membrane component  37.9 
 
 
266 aa  126  5e-28  Streptosporangium roseum DSM 43021  Bacteria  normal  0.102706  normal 
 
 
-
 
NC_007650  BTH_II1115  dipeptide ABC transporter, permease protein, putative  36.74 
 
 
300 aa  125  6e-28  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_3573  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
297 aa  125  6e-28  Burkholderia ambifaria AMMD  Bacteria  normal  0.172272  normal  0.144154 
 
 
-
 
NC_013739  Cwoe_2116  binding-protein-dependent transport systems inner membrane component  35.11 
 
 
295 aa  125  6e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.438242  normal 
 
 
-
 
NC_010682  Rpic_1255  binding-protein-dependent transport systems inner membrane component  36.28 
 
 
299 aa  125  7e-28  Ralstonia pickettii 12J  Bacteria  normal  0.356305  normal  0.757644 
 
 
-
 
NC_011353  ECH74115_0983  glutathione ABC transporter, permease protein GsiD  32.44 
 
 
303 aa  125  7e-28  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.631876 
 
 
-
 
NC_010658  SbBS512_E2516  glutathione ABC transporter, permease protein GsiD  32.44 
 
 
303 aa  125  7e-28  Shigella boydii CDC 3083-94  Bacteria  normal  0.245881  n/a   
 
 
-
 
NC_009801  EcE24377A_0903  glutathione ABC transporter, permease protein GsiD  32.44 
 
 
303 aa  125  7e-28  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4223  binding-protein-dependent transport systems inner membrane component  33.72 
 
 
301 aa  125  8.000000000000001e-28  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_0857  glutathione ABC transporter, permease protein GsiD  32.44 
 
 
303 aa  125  8.000000000000001e-28  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4054  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
297 aa  125  8.000000000000001e-28  Burkholderia ambifaria MC40-6  Bacteria  normal  0.181968  normal 
 
 
-
 
CP001509  ECD_00799  predicted peptide transporter subunit: membrane component of ABC superfamily  32.06 
 
 
303 aa  124  1e-27  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2810  binding-protein-dependent transport systems inner membrane component  32.06 
 
 
303 aa  124  1e-27  Escherichia coli DH1  Bacteria  normal  0.482593  n/a   
 
 
-
 
NC_012892  B21_00816  hypothetical protein  32.06 
 
 
303 aa  124  1e-27  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A0838  ABC peptide transporter, inner membrane subunit  36.28 
 
 
301 aa  124  1e-27  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00766751  normal 
 
 
-
 
NC_010681  Bphyt_3128  binding-protein-dependent transport systems inner membrane component  36.28 
 
 
301 aa  124  1e-27  Burkholderia phytofirmans PsJN  Bacteria  normal  0.265268  normal 
 
 
-
 
NC_011149  SeAg_B0892  glutathione transport system permease protein GsiD  35.19 
 
 
303 aa  124  2e-27  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4391  oligopeptide ABC transporter oligopeptide-binding protein  30.8 
 
 
299 aa  124  2e-27  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4232  oligopeptide transport system, permease  30.8 
 
 
299 aa  124  2e-27  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4244  oligopeptide ABC transporter, permease  30.8 
 
 
299 aa  124  2e-27  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011080  SNSL254_A0919  glutathione transport system permease protein GsiD  35.19 
 
 
303 aa  124  2e-27  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.285756  normal 
 
 
-
 
NC_011083  SeHA_C0981  glutathione transport system permease GsiD  35.19 
 
 
303 aa  124  2e-27  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A0952  glutathione transport system permease GsiD  35.19 
 
 
303 aa  124  2e-27  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.642486  normal 
 
 
-
 
NC_009767  Rcas_3840  binding-protein-dependent transport systems inner membrane component  31.78 
 
 
298 aa  124  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  decreased coverage  0.00781305  normal  0.217965 
 
 
-
 
NC_007530  GBAA_4731  oligopeptide ABC transporter oligopeptide-binding protein  30.8 
 
 
299 aa  124  2e-27  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4609  oligopeptide ABC transporter, oligopeptide-binding protein  30.8 
 
 
299 aa  124  2e-27  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008148  Rxyl_2422  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
311 aa  124  2e-27  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5171  binding-protein-dependent transport systems inner membrane component  33.63 
 
 
311 aa  124  2e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.23044 
 
 
-
 
NC_010625  Bphy_6649  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
294 aa  124  2e-27  Burkholderia phymatum STM815  Bacteria  normal  0.789298  normal 
 
 
-
 
NC_008686  Pden_0237  binding-protein-dependent transport systems inner membrane component  34.36 
 
 
290 aa  124  2e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.997501  normal  0.847152 
 
 
-
 
NC_008688  Pden_5075  binding-protein-dependent transport systems inner membrane component  34.48 
 
 
272 aa  124  2e-27  Paracoccus denitrificans PD1222  Bacteria  normal  0.154699  normal  0.468541 
 
 
-
 
NC_009767  Rcas_3847  binding-protein-dependent transport systems inner membrane component  31 
 
 
297 aa  124  2e-27  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.14687 
 
 
-
 
NC_011094  SeSA_A1002  glutathione transport system permease GsiD  35.19 
 
 
303 aa  124  2e-27  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1613  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
296 aa  123  3e-27  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2741  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
296 aa  123  3e-27  Shewanella baltica OS223  Bacteria  normal  normal  0.350428 
 
 
-
 
NC_009380  Strop_1671  binding-protein-dependent transport systems inner membrane component  37.79 
 
 
293 aa  123  3e-27  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2848  ABC transporter permease protein  35.04 
 
 
276 aa  123  3e-27  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_4424  binding-protein-dependent transport systems inner membrane component  34.87 
 
 
297 aa  123  3e-27  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.434464  normal 
 
 
-
 
NC_012850  Rleg_0424  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
296 aa  123  3e-27  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.271529  normal  0.0400541 
 
 
-
 
NC_009668  Oant_3739  binding-protein-dependent transport systems inner membrane component  32.8 
 
 
300 aa  123  3e-27  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.146994  n/a   
 
 
-
 
NC_009997  Sbal195_1636  binding-protein-dependent transport systems inner membrane component  31.7 
 
 
296 aa  123  3e-27  Shewanella baltica OS195  Bacteria  normal  normal  0.766979 
 
 
-
 
NC_010505  Mrad2831_5081  binding-protein-dependent transport systems inner membrane component  34.74 
 
 
309 aa  123  3e-27  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.805329  normal  0.0512458 
 
 
-
 
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