| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_5291 |
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| Symbol | dppC |
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| ID | 7380659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011988 |
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| Strand | + |
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| Start bp | 294708 |
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| End bp | 295556 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643648921 |
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| Product | ABC transporter membrane spanning protein (dipeptide) |
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| Protein accession | YP_002547158 |
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| Protein GI | 222106367 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAGCA TCGCAAAACG CAGCATGTTC TCTCTCAGAT TGCCCCTTAG TGTTTCGATA
GGGCTGGCGC TTGCACTTGT CATCGTGCTG CTTTCTCTGC TGTCATCCTA TATTGCTCCG
TTTGATCCGA TGAGGATGGC GTCAGGCCCC CGGTTGGCGG CGCCATCGGC AGCGCATCTT
TTCGGAACCG ACGAATTTGG CCGCGACCTT TTCAGCCGCG TGCTGCTCGG CGGACGGTTG
TCGCTTGGCA TCGGCCTCAG CGCCGTCGTC AGCGGTCTGG TAATCGGCGG TCTCATTGGT
CTGATTGCCG CTTTCGGTGG CCGGGTTGTC GAGGCTCTGC TGTTGCGGCT TATCGATGTG
CTCTATTCGT TTCCCGATAC GTTGATCGCC CTTGCGCTGG TCGCTTTCCT CGGGCCAGGA
ATAGAGAACG CAACACTGGC AATCGCCATC AGTCTCGTTC CCTTTTATGC GCGGGTGGCC
TATGGCCTTG CGGCTGCCGA GCGGGCAAAA CCCTATATCG AAGCCGCCAG ACTTGCAGGC
ACACGGTCCG CCCGGCTGGT CCGCGTCCAT GTCATGCCGA ATATTGTGCA AAGCCTGATC
GTCATGGCAA CACTCGGATT TTCGTCCGCC ATCCTGTCCG CCGCCGGGCT TTCGTTTCTG
GGGCTTGGGG TCCAGCCGCC ATCGCCGGAA TGGGGCGCTA TCCTTGCCTC GGGGCGCAAT
TATATCACCA AAGCCCCATG GATATTGATC TTTCCCGGAT TGGCGATCTG CCTCACCGTG
CTTTCCTTCA ATCTGATCGG TGACAGTCTC AGGGACCTCA TCGACCCCCG CCGAAAGGCA
AGACCATGA
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| Protein sequence | MTSIAKRSMF SLRLPLSVSI GLALALVIVL LSLLSSYIAP FDPMRMASGP RLAAPSAAHL
FGTDEFGRDL FSRVLLGGRL SLGIGLSAVV SGLVIGGLIG LIAAFGGRVV EALLLRLIDV
LYSFPDTLIA LALVAFLGPG IENATLAIAI SLVPFYARVA YGLAAAERAK PYIEAARLAG
TRSARLVRVH VMPNIVQSLI VMATLGFSSA ILSAAGLSFL GLGVQPPSPE WGAILASGRN
YITKAPWILI FPGLAICLTV LSFNLIGDSL RDLIDPRRKA RP
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