Gene Bphy_4223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4223 
Symbol 
ID6245750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1214235 
End bp1215140 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content64% 
IMG OID642595982 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001860389 
Protein GI186473047 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACGA CTGCCGACAA CACCCAGGCC GTCCAGGCCG CTCGCGAGCC ACGCGCGATC 
CGCACGCCGT GGAGCGAGTT CTGGCGCAAG TTCCGCAAGC AGCACGTTGC CCTCGCGGCG
GGCATGTTCG TGCTGCTGCT CGTCGCCGTG TCGATCGCGG GTCCGCATAT CGTTCCGTAC
GACCCGGAAA ACTATTTCGA CTACGACGCG CTGAATGCGG GGCCGTCGGC CGCGCACTGG
TTCGGCGTCG ACTCGCTGGG CCGCGATATC TTCAGCCGCA TCGTCGCAGG TACGCGCATT
TCGCTGGCGG CGGGCTTTGT ATCCGTCGCG ATCGGCGCGA TCGTCGGCAC GTTCTTCGGT
CTGCTCGCGG GCTATTACGA GGGCTGGTGG GATCGCGTCA CGATGCGCGT GGCCGACGTG
CTGTTCGCAT TCCCCGGCAT TCTGCTCGCG ATAGGCATCG TGGCGATTCT CGGCAACGGC
ATGATCAACG TGATCGCGGC TGTCGCCGTG TTCAGCATTC CCGCATTCGC GCGGCTCGTG
CGCGGCAATA CGCTGATGCT GAAGCAGCTG ACGTATATCG AAGCAGCGCG CAGCATCGGC
GCATCGGACT GGACCATCAT CATGCGTCAC ATTCTGCCGG GCACGATTTC ATCGGTAATC
GTGTATCTGA CGATGCGTAT CGGCACGTCG ATCATCACGG CCGCGAGCCT GTCGTTCCTC
GGCCTCGGCG CGCAGCCGCC GACGCCCGAG TGGGGCGCGA TGCTCAACGA AGCACGCGCT
GACATGGTGA CGGCGCCGCA TATCGCGCTG TTTCCGAGTC TCGCGATCTT CCTGACGGTG
CTCGCGTTCA ACCTGCTCGG CGACGGTCTG CGCGACGCAC TCGATCCCAA ACTGGACCGC
CCATGA
 
Protein sequence
MSTTADNTQA VQAAREPRAI RTPWSEFWRK FRKQHVALAA GMFVLLLVAV SIAGPHIVPY 
DPENYFDYDA LNAGPSAAHW FGVDSLGRDI FSRIVAGTRI SLAAGFVSVA IGAIVGTFFG
LLAGYYEGWW DRVTMRVADV LFAFPGILLA IGIVAILGNG MINVIAAVAV FSIPAFARLV
RGNTLMLKQL TYIEAARSIG ASDWTIIMRH ILPGTISSVI VYLTMRIGTS IITAASLSFL
GLGAQPPTPE WGAMLNEARA DMVTAPHIAL FPSLAIFLTV LAFNLLGDGL RDALDPKLDR
P