Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_2741 |
Symbol | |
ID | 7087120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 3216824 |
End bp | 3217714 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643461628 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002358652 |
Protein GI | 217973901 |
COG category | [V] Defense mechanisms |
COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.350428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCAG TTAAAATTTA TCAAGAAGAT CAGATTGCCT CCCCGACTAT GCGGGTTTGG CTTAACTTTT CGGCTAATCC TTTCGCCTTG GCAGGTCTGT GGACGATTGC TTTCCTGCTT TTGCTAACGC TATTTGGTCC TATGATTGCG CCCTTCCCAC CAGAGGCACA AGATCCCAGA GCCTTGCTAT TGCCGCCCTC GTGGGACCCC TCAGGCACAG TGGCGCACTT TTTAGGGACA GACGACTTAG GCCGCGATAT CTTCAGCCGA TTATTACACG GCGCGCACTT GACCTTTGGT ATGGCGCTGC TGATCGTCGT CACCGCATTA TTCACAGGCT TTATCATAGG GTCACTGTCC GGCATGATGC GGGGCTTAAA ATCCAGTATT CTCGGGCACT TACTCGATGC ATTGTTATCA ATCCCTTCAT TATTGATGGC CATTTTAGTG GTGGCGGTAA TGGGGCCAGG GCTTGAAAAT GTGTTCTGGG CCGTCGGAAT TGCCTTAACC CCGCAATTTG TGCGCTCGAT ACACCAGTCA GTGCATGAGG AGTTGCAAAA AGAATACGTC ACAGCGGCGC GTTTAGATGG CGCGAACTCA ATGCAAATTT TTTGGTATGT CATCATGCCA AACGTGTGGG AAGTGGTGAT CATTCAAACC ACGCTTGCCA TTTCTGCCGC CATTTTAGAT ATCGCCGCCC TCGGTTTTTT AAGCTTGGGC GCGCAGGCAC CAAGCCCAGA ATGGGGCGCT ATGGTCGCCC AAGGTATGGA TAATTTATTA ACGGCGCCTT GGGCTGTAAC TATCCCGGGT TTAGCGATTC TTTTCAGTGT GCTTTCCATT AACTTGGTTG GCGATGGCCT ACGGTCGGCG CTTGCGCCCA TCAGAAACTA A
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Protein sequence | MPPVKIYQED QIASPTMRVW LNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFPPEAQDPR ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALLIVVTAL FTGFIIGSLS GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS VHEELQKEYV TAARLDGANS MQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG AQAPSPEWGA MVAQGMDNLL TAPWAVTIPG LAILFSVLSI NLVGDGLRSA LAPIRN
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