Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal195_1636 |
Symbol | |
ID | 5753371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS195 |
Kingdom | Bacteria |
Replicon accession | NC_009997 |
Strand | - |
Start bp | 1977235 |
End bp | 1978125 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641287911 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001554069 |
Protein GI | 160874753 |
COG category | [V] Defense mechanisms |
COG ID | [COG4171] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.766979 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCACCAG TTAAAATTTA TCAAGAAGAT CAGATTGCCT CACCGACTAT GCGGGTTTGG CTTAACTTTT CGGCTAATCC TTTCGCCTTG GCAGGTCTGT GGACGATTGC TTTCCTGCTC TTGCTAACGC TATTTGGTCC TATGATTGCG CCCTTCCCAC CAGAGGCACA AGATCCCAGA GCCTTGCTAT TGCCGCCCTC TTGGGATCCC TCAGGCACTG TGGCACACTT TTTAGGCACA GACGATTTAG GCCGCGATAT CTTCAGCCGA TTATTACACG GCGCGCACTT GACCTTTGGT ATGGCGCTGC TGATCGTCGT CACCGCATTA TTCACAGGCT TTATTATAGG ATCACTGTCG GGCATGATGC GGGGCTTAAA ATCCAGTATC CTCGGGCACT TACTCGATGC GCTGTTATCC ATTCCCTCAT TATTGATGGC CATTTTAGTG GTGGCGGTAA TGGGGCCAGG ACTTGAAAAT GTGTTCTGGG CCGTCGGGAT AGCGTTAACC CCGCAATTTG TGCGCTCGAT ACACCAATCA GTGCATGAAG AGTTGCAAAA AGAATACGTC ACAGCGGCGC GTTTAGATGG CGCGAACTCA ATGCAAATTT TTTGGTATGT CATCATGCCA AACGTGTGGG AAGTGGTGAT CATTCAAACC ACACTTGCCA TTTCGGCCGC CATTTTAGAT ATCGCAGCCC TCGGTTTTTT AAGCTTGGGG GCGCAGGCAC CAAGCCCTGA ATGGGGCGCT ATGGTCGCCC AAGGTATGGA TAATTTATTA ACGGCGCCTT GGGCTGTAAC TATCCCGGGC TTAGCGATTC TTTTCAGTGT GCTTTCCATT AACTTGGTTG GCGATGGCCT ACGGTCGGCG CTTGCGCCCA TCAGAAACTA A
|
Protein sequence | MPPVKIYQED QIASPTMRVW LNFSANPFAL AGLWTIAFLL LLTLFGPMIA PFPPEAQDPR ALLLPPSWDP SGTVAHFLGT DDLGRDIFSR LLHGAHLTFG MALLIVVTAL FTGFIIGSLS GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS VHEELQKEYV TAARLDGANS MQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG AQAPSPEWGA MVAQGMDNLL TAPWAVTIPG LAILFSVLSI NLVGDGLRSA LAPIRN
|
| |