Gene Cwoe_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3343 
Symbol 
ID8733792 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3553993 
End bp3554865 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content73% 
IMG OID646503960 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003395136 
Protein GI284044796 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0496107 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG CCCCCGCACC GCCGCCCGCG GCCGCCGCAG CGGGCGTCCG CGCGCGCCGG 
CAGCGCCCGC CGCTGCTCGT GCTGCTCGCG ATGGTCGTCG TCGCGGCGAC GGTCGTGTGC
GCGATCGCAG GCGCGGCGAT CGCGCCCCAC GACCCCGACG CGCAGGACCT CGTCGCCGGC
CTTCAGACGC CGAGCGCCGC CCACCTGCTC GGCACCGACG ACTCGGGCCG GGACCTCTTC
TCGCGACTGA TCGCCGGCGC CCGCACCGCG CTCGTCGGTC CGCTGCTGAT GATGCTCGGC
GCGGCCGTGA TCGGCACCGT CCTCGGGCTG ATCGCAGGCT ACTTCGGCGG CTGGCGCGAC
TCCGCGATCA TGCGCGCCGT CGACGTCGTC TACGCGCTGC CGTCGCTGCT GGTGGCGATC
ATCCTCGTCG GCGTGATCGG CGGCGGCTAC GCCGTCGCGG TCGGGATCCT CGTCGTCCTC
TTCGGCCCTG CCGACGCGCG CCTGATCCGT GGCGCGACGC TGGCGCAGCG CAGCCTTCCG
TACGTCGACG CAGCGCGCAC GCTCGGCCTC TCGCGGCGGA CGATCATGTT CCGCCACATC
TGGCCCAACA TCCTGCCGCT GATCGTCGCG AACGCCTTCC TGAACTTCGC CTACGCGCTC
GTCGCGCTGT CCGCGATGTC GTTCCTCGGC ATCGGCGTGG CGCCCGGCGA GGCCGACTGG
GGACGCATGC TGAACGACAA CCTCTCGCTG ATCGAGGACA ACCCGGTCGC CGTGCTGGCG
CCTGGGATCG CGCTGGTGCT GCTCGCCGTC GCGATGAACC TGCTCGGCGA CTGGGCCTAC
GAGCGCCTCT CCGACCGGGG TCGCGCCCGA TGA
 
Protein sequence
MSAAPAPPPA AAAAGVRARR QRPPLLVLLA MVVVAATVVC AIAGAAIAPH DPDAQDLVAG 
LQTPSAAHLL GTDDSGRDLF SRLIAGARTA LVGPLLMMLG AAVIGTVLGL IAGYFGGWRD
SAIMRAVDVV YALPSLLVAI ILVGVIGGGY AVAVGILVVL FGPADARLIR GATLAQRSLP
YVDAARTLGL SRRTIMFRHI WPNILPLIVA NAFLNFAYAL VALSAMSFLG IGVAPGEADW
GRMLNDNLSL IEDNPVAVLA PGIALVLLAV AMNLLGDWAY ERLSDRGRAR