Gene Aaci_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0114 
Symbol 
ID8423580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp133099 
End bp133989 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content57% 
IMG OID645026224 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003183567 
Protein GI258510133 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTG CACCCGATCC CCATTTCTCA CCCGTGGAGC CAACATCCTC GCCGGCGCGA 
ACTCTGCCCC CAAGGTTGCT TCGTATCACT AACCCGTCAC TTGCGGCTGG TGGTGCCCTA
GTGCTCTTCA TCCTAGTCGT TGCGGCGATG GCTCCTTACA TTGCACCGTA TGGACCCAAT
CAAGTCGATT ACAGTGCGGT GCTTCAAGGG CCATCGGCGC ATCACTGGTT CGGAACGGAT
CAACTGGGCC GCGACCAATT GTCCCGGATT CTGTTTGGGG CACGCACTTC GATGGAAGTC
AGTGTTGGGG CGCTTGTCGT GGGTGCAGGA CTTGGGGTGC CCGTCGGTCT CTTTGCGGGA
TACTACCGAG GATTCCTTGA CACCTGGGTC ATCATGCGAA TCATCGACGC AATCCAGGCT
TTCCCCTTCC TCATCCTTGC GCTTGTGCTC GCTGCGATGC TCGGCCCAGG ATCTCGAAAT
GCCATGATCG CGATCGGAAT CGGCCTTGTG CCTACGTTTG CTCGAACCGC GCGAGCACAA
ATGCTTCAGG AACTAGGGAA GGATTACATT GATGCGGCTA GGGTGGTGGG ATGCACTCAC
GCGCGCATCA TTTTTCGCCA CATTCTGCCG AACGCCCTAA CCCCCATCAT CGTGCAGGCT
ACGCTCGCGA TGGCCTCGAG CATTGTAGCT GAGGCAAGCC TGGAGTACTT GGGGCTAGGG
GTTCAGCCTC CCACAGCGAG CTGGGGTTCG ATGTTACAGT CTGCCCAAGG CTATCTGCAA
CTGGCCCCTT GGCTCGTATT ATTTCCAGGA CTAGCGCTTG TGTTCAGTGT CGTCTCCTTC
AATCTCCTCG GTGATGGCGT CCAGCGTTGG CTCAACCGCA AGATCTCTTA A
 
Protein sequence
MSLAPDPHFS PVEPTSSPAR TLPPRLLRIT NPSLAAGGAL VLFILVVAAM APYIAPYGPN 
QVDYSAVLQG PSAHHWFGTD QLGRDQLSRI LFGARTSMEV SVGALVVGAG LGVPVGLFAG
YYRGFLDTWV IMRIIDAIQA FPFLILALVL AAMLGPGSRN AMIAIGIGLV PTFARTARAQ
MLQELGKDYI DAARVVGCTH ARIIFRHILP NALTPIIVQA TLAMASSIVA EASLEYLGLG
VQPPTASWGS MLQSAQGYLQ LAPWLVLFPG LALVFSVVSF NLLGDGVQRW LNRKIS