| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3557 |
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| Symbol | |
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| ID | 5671926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4221444 |
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| End bp | 4222280 |
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| Gene Length | 837 bp |
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| Protein Length | 278 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242443 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001507863 |
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| Protein GI | 158315355 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.936822 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAGC CCTCCGCCGA ACGTCAGCAC TTCCGCGGGC GCACCGGGCT GGTGATCGGT
CTCCTCGTCC TGGGCGTACC CGTGCTGACG ACCCTCGTCG GCATCTTCGT CCACCCCTAC
CCGACGACCG CCAGCGTCTC CGGCCCGCTC ACCGGGCCGA GCGGGGCGCA CCCGCTCGGA
ACCGACCTGC TGGGCCGGGA CGTGCTCTCC CGCATGCTCG TCGGCGGCCG GAGCCTGCTG
CTCATCACGA TCCTCGCGGT GGTCTCCGCC CAGCTGCTCG CCGTCACCGC GGGCCTGCTC
GCGGGCTGGC TGGGCCGGGG CGGCGCCCGG GCCGTGCTGG CGGTGTTCGA CGTCATCCTG
GCCGTCCCCG CGGTGCTGGT CCTGGCCGCG GCGGCGAGCG CGCTGGGCGT GGGTGGTCTC
GCCGCCTTCG CCGCGATCGT CGTCGTCCTC ACGCCGCCCA CCGCGCGGGT CGTCTACGCG
GCGACCCGCG CGCTCGTCAC GGAGCCCTAC GTCGAGGCGG CGGTCCTGTG CGGGACGCCG
ACCCGCCAGA TCCTCAGCCG CGACCTGCTC CCCAACCTCC GGACGATCAT CGTCGCGGAT
GCCGGCACGC GGATGGTCGA GGCCGTCATC ATCATCAGCG CGGCTGGCTT CCTGGGCTTC
GGCCCCCAGC CGCCGACTCC GGACTGGGGC CAGATGATCA ACGAGAACGG CGCGGGCATC
ACGGTCGCGC CCTGGTGCGT GCTGGCCCCG GCCCTCGCGA TCACGATGCT GGCGGTGGGC
ACGAACCTGA TCAGCGACTG GCTGATCACC CACTCCGACG GGACGAACCG GGAATGA
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| Protein sequence | MSEPSAERQH FRGRTGLVIG LLVLGVPVLT TLVGIFVHPY PTTASVSGPL TGPSGAHPLG
TDLLGRDVLS RMLVGGRSLL LITILAVVSA QLLAVTAGLL AGWLGRGGAR AVLAVFDVIL
AVPAVLVLAA AASALGVGGL AAFAAIVVVL TPPTARVVYA ATRALVTEPY VEAAVLCGTP
TRQILSRDLL PNLRTIIVAD AGTRMVEAVI IISAAGFLGF GPQPPTPDWG QMINENGAGI
TVAPWCVLAP ALAITMLAVG TNLISDWLIT HSDGTNRE
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