Gene Pars_1495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1495 
Symbol 
ID5055241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1352980 
End bp1353771 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content58% 
IMG OID640469037 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001153703 
Protein GI145591701 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCTGA AGGTAGGAAC GGCGATCGTC GCCGTCGTGG TGTTGCTATC TTTGCTGGCC 
CCCCTAATAG CGCCGTACGA CCCCACGAAA AGGGCAGGCC CTCCGCTGTC GCCGCCGAGC
GCCCAGTACC TCCTTGGGAC AGACAACCTA GGCCGCGACG TCTGGAGCAG GCTCCTCTAC
GGCGGCCAGG TAATCATAGG CATCTCTCTT CTGGCCACAC TCCTCTCGGC GTCAATCGGC
TTCTCTCTTG GGATGATCTC GGGATACATC GGCAGGAAAC TTGACAAGGT CCTCAACATG
GTCATGGACA GCATGTACGC CTTCCCCAGC CTCATATTGG CCATCGCCAT AGCCAGCGTG
CTGGGCCCCA GCCCGCTCAA CGCGGCGCTA GCAATAGGCG TAGTTTACAT CCCCACCTAC
TTCAGGATGG CTCGTAACGA GACGCTGGTG GTGAAGTCCA GCCTATTCGT AGAGGCGGCA
GTTTCTCTGG GAATGCCGCG GAGGAGAATT ATATTTAGGC ACATACTCCC CAACCTCGTA
CCCTCGCTGG TGGTCGTGGC GACGATAAAC ATCGCGGATG CGGCGCTCAC CGAGTCGGCC
CTCGCCTTCT TCGGGTATAC GGTAACTCCG ACTACGCCCG ATTGGGGCCT CGACTTGTCG
AGCGCCCGCT CCTACATAAT AAACGGCTAC TGGTGGCTGT TGGCGCCAGG GTTTTTCATA
GTACTAACTG CCCTGGGCTT CTCCCTGCTC GGAGAGGCTC TTGGGGAGAG GATAGGAAAA
AGAGGGGATT AA
 
Protein sequence
MMLKVGTAIV AVVVLLSLLA PLIAPYDPTK RAGPPLSPPS AQYLLGTDNL GRDVWSRLLY 
GGQVIIGISL LATLLSASIG FSLGMISGYI GRKLDKVLNM VMDSMYAFPS LILAIAIASV
LGPSPLNAAL AIGVVYIPTY FRMARNETLV VKSSLFVEAA VSLGMPRRRI IFRHILPNLV
PSLVVVATIN IADAALTESA LAFFGYTVTP TTPDWGLDLS SARSYIINGY WWLLAPGFFI
VLTALGFSLL GEALGERIGK RGD