Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_1750 |
Symbol | |
ID | 7269456 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 2139584 |
End bp | 2140408 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643566592 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002463087 |
Protein GI | 219848654 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.120165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.923474 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC GACAAGTTGG CCGCGCCTTT TTTGCCGATC CGGCAACTGC GGCCGGTACC ATCATTGTGA TAGCTTTTCT CGTGCTGGCG CTCTTTGGAC CGATCATTGC ACCGTACAGT CCAACCAAAC AGCAGATAAA CGCTATCCGC CAACCACCAT CACTTAACCA TCTCTTCGGC ACCGACCGCC TCGGTCGCGA TCTGTTCGGT CGTGTGGTGT ATGGAGCACG CGATATTCTG GCGTTGGCCG GTGGTGGTAC AGCGCTTGCC GTAGTATTGG GTACGCTCAT TGGCGTCAGC ACCACCTACC TCGGCGGTTG GATCGAAGAG CTGGTATTCC GCTTATTCGA CGGTATCCTT GCTCTGCCGG CACTGTTACT GGCACTGCTC CTGCTCGGCG CTGTGGGACC ATCACGTACC GGTGTCCTGT TCGTCATCGT TGTTGTCTAT ACACCCATTG TCGCCCGTGT GGTGCGTAGT GTAGTCCTGT CGCTCAAACC GCGTGGTTTT ATCGAAGCGG CCCGTATGCG CAACGAGCGG CTGAGTTATA TTCTGTGGCG CGAATTGTTG CCTCTGGTTG CCCCAACTCT TGCCGTCGAG GCTGCACTAC GCTTTTCATA CGCAATTTTT TTGGTGGCGT CGCTTGGTTT TCTTGGCATC GGGGTACAGC CACCAAACCC TGATTGGGGT CTGATGGTGC TCGAAGCGCG TAACGAAGCT GTTCTCGCCC CTTGGTCGCT TTACGTGCCG GCAACAGCTA TTTCCCTTTT AGTGATCGGG GTGAATCTGA TGGCCGAGGG GGTGCGGCGA GCACTGAATA CCTGA
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Protein sequence | MNVRQVGRAF FADPATAAGT IIVIAFLVLA LFGPIIAPYS PTKQQINAIR QPPSLNHLFG TDRLGRDLFG RVVYGARDIL ALAGGGTALA VVLGTLIGVS TTYLGGWIEE LVFRLFDGIL ALPALLLALL LLGAVGPSRT GVLFVIVVVY TPIVARVVRS VVLSLKPRGF IEAARMRNER LSYILWRELL PLVAPTLAVE AALRFSYAIF LVASLGFLGI GVQPPNPDWG LMVLEARNEA VLAPWSLYVP ATAISLLVIG VNLMAEGVRR ALNT
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