Gene Cagg_1750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_1750 
Symbol 
ID7269456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp2139584 
End bp2140408 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content56% 
IMG OID643566592 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_002463087 
Protein GI219848654 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.120165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.923474 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC GACAAGTTGG CCGCGCCTTT TTTGCCGATC CGGCAACTGC GGCCGGTACC 
ATCATTGTGA TAGCTTTTCT CGTGCTGGCG CTCTTTGGAC CGATCATTGC ACCGTACAGT
CCAACCAAAC AGCAGATAAA CGCTATCCGC CAACCACCAT CACTTAACCA TCTCTTCGGC
ACCGACCGCC TCGGTCGCGA TCTGTTCGGT CGTGTGGTGT ATGGAGCACG CGATATTCTG
GCGTTGGCCG GTGGTGGTAC AGCGCTTGCC GTAGTATTGG GTACGCTCAT TGGCGTCAGC
ACCACCTACC TCGGCGGTTG GATCGAAGAG CTGGTATTCC GCTTATTCGA CGGTATCCTT
GCTCTGCCGG CACTGTTACT GGCACTGCTC CTGCTCGGCG CTGTGGGACC ATCACGTACC
GGTGTCCTGT TCGTCATCGT TGTTGTCTAT ACACCCATTG TCGCCCGTGT GGTGCGTAGT
GTAGTCCTGT CGCTCAAACC GCGTGGTTTT ATCGAAGCGG CCCGTATGCG CAACGAGCGG
CTGAGTTATA TTCTGTGGCG CGAATTGTTG CCTCTGGTTG CCCCAACTCT TGCCGTCGAG
GCTGCACTAC GCTTTTCATA CGCAATTTTT TTGGTGGCGT CGCTTGGTTT TCTTGGCATC
GGGGTACAGC CACCAAACCC TGATTGGGGT CTGATGGTGC TCGAAGCGCG TAACGAAGCT
GTTCTCGCCC CTTGGTCGCT TTACGTGCCG GCAACAGCTA TTTCCCTTTT AGTGATCGGG
GTGAATCTGA TGGCCGAGGG GGTGCGGCGA GCACTGAATA CCTGA
 
Protein sequence
MNVRQVGRAF FADPATAAGT IIVIAFLVLA LFGPIIAPYS PTKQQINAIR QPPSLNHLFG 
TDRLGRDLFG RVVYGARDIL ALAGGGTALA VVLGTLIGVS TTYLGGWIEE LVFRLFDGIL
ALPALLLALL LLGAVGPSRT GVLFVIVVVY TPIVARVVRS VVLSLKPRGF IEAARMRNER
LSYILWRELL PLVAPTLAVE AALRFSYAIF LVASLGFLGI GVQPPNPDWG LMVLEARNEA
VLAPWSLYVP ATAISLLVIG VNLMAEGVRR ALNT