Gene EcolC_2812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_2812 
Symbol 
ID6065029 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp3074230 
End bp3075141 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content53% 
IMG OID641602218 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001725767 
Protein GI170020813 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTAT TTAACTGGCG ACGTCAGGCG GTGTTAAACG CCATGCCACT GGTCAAACCT 
GACCAGGTAC GTACACCGTG GCATGAATTC TGGCGACGAT TTCGCCGTCA GCATATGGCG
ATGACCGCCG CATTGTTCGT TATTTTATTG ATTGTGGTGG CTATTTTTGC ACGCTGGATC
GCTCCCTATG ACGCCGAAAA TTATTTTGAT TATGACAATC TGAATAACGG ACCTTCTTTG
CAGCACTGGT TTGGCGTCGA TTCACTGGGG CGTGACATTT TCAGCCGTGT CCTGGTTGGT
GCGCAAATCT CGCTGGCGGC GGGCGTGTTT GCCGTGTTTA TCGGTGCGGC GATCGGGACG
TTGCTGGGCT TGCTGGCTGG ATATTATGAA GGCTGGTGGG ATCGGCTGAT CATGCGCATT
TGCGATGTGC TGTTTGCCTT CCCGGGTATT TTACTGGCGA TCGCTGTTGT TGCGGTGTTG
GGAAGCGGCA TTGCTAACGT GATTATCGCA GTCGCCATTT TTTCCATCCC CGCGTTTGCC
CGACTGGTGC GCGGCAACAC GCTGGTGTTG AAACAGCAAA CCTTTATTGA GTCAGCACGC
AGTATTGGTG CCAGCGATAT GACCATTTTA TTGCGTCATA TCTTGCCTGG GACCGTCTCG
TCTATCGTGG TGTTTTTCAC CATGCGCATT GGCACCTCGA TTATCTCTGC CGCCAGCCTG
TCATTTCTCG GCCTCGGTGC TCAACCGCCG ACACCAGAGT GGGGAGCAAT GCTCAATGAG
GCACGAGCGG ATATGGTTAT CGCGCCGCAT GTCGCTATTT TTCCGGCCCT GGCTATTTTT
CTGACCGTAC TGGCGTTCAA TTTGTTGGGC GATGGTTTAC GCGATGCGCT GGATCCGAAA
ATTAAAGGAT AG
 
Protein sequence
MRLFNWRRQA VLNAMPLVKP DQVRTPWHEF WRRFRRQHMA MTAALFVILL IVVAIFARWI 
APYDAENYFD YDNLNNGPSL QHWFGVDSLG RDIFSRVLVG AQISLAAGVF AVFIGAAIGT
LLGLLAGYYE GWWDRLIMRI CDVLFAFPGI LLAIAVVAVL GSGIANVIIA VAIFSIPAFA
RLVRGNTLVL KQQTFIESAR SIGASDMTIL LRHILPGTVS SIVVFFTMRI GTSIISAASL
SFLGLGAQPP TPEWGAMLNE ARADMVIAPH VAIFPALAIF LTVLAFNLLG DGLRDALDPK
IKG