| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3233 |
|---|
| Symbol | |
|---|
| ID | 3721840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodobacter sphaeroides 2.4.1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007494 |
|---|
| Strand | + |
|---|
| Start bp | 292202 |
|---|
| End bp | 293104 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640072908 |
|---|
| Product | ABC peptide transporter, inner membrane subunit |
|---|
| Protein accession | YP_354748 |
|---|
| Protein GI | 77465245 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG TGACAAAGCC CGTTTCGCAG GGCTCGGAAA CGAAGCGCCT GCTGCGCGAG
TTCTGGTTCT ACTTCTCCGA GAACCGTGGT GCCGTGATCG GCCTCTGCGT CTTCCTCGCG
CTCGTGCTGA TCGCGGCCTT CGCCCCGCTG CTCGCGCCGC ACAGCCCGAC GCTCCAGAAC
CGCGACGCGC TGCTCGTGCC GCCGTTCTGG GAGCAGGGCG GCAACCCGAG CTTCCTTCTC
GGCACCGATG CGGTCGGCCG CGACATCCTC TCGCGGCTGA TCTTCGGCGC GCGGCAGTCG
CTCTTCATCG GCTGTGTGGT GGTCTCGATC GCGCTCACGG GCGGCATCAT CCTCGGCCTC
GTTGCGGGCT TCTTCGGCGG ATGGGTGGAT GCGGTCATCA TGCGGGTGAT GGATGTGATC
CTGGCCTTCC CGTCGCTGCT CCTCGCGCTC GTGATGGTGG CGATCCTCGG GCCGGGGCTG
ACCAACGCGA TGATCGCCAT TGCCATCGTG CTGCAGCCCC ACTTCGCGCG GCTCACGCGG
GCGGCGGTGA TGGCCGAGAA GAACCGCGAA TATGTCATGG CCGCGCGCGT GGCCGGGGCA
GGGCGCCTGC GGCTGATGTT CCGCACCATC CTGCCCAACT GCCTCGCGCC GCTGATCGTG
CAGGGGACGC TCTCCTTCTC GAATGCCGTG CTCGACGCGG CGGCGCTCGG CTTCCTCGGC
ATGGGCGCGC AGCCGCCGAC CCCCGAATGG GGCACGATGC TTGCCGAAGC GCGCGAGTTC
ATCCTGCGCG CCTGGTGGGT GGTGACTTTC CCCGGTCTCG CGATCCTCAT CACCGTGCTC
GCGATCAACC TCGTGGGCGA CGGGCTGCGC GACGCGCTCG ACCCGAAACT GAAGCGGAGC
TGA
|
|---|
| Protein sequence | MTDVTKPVSQ GSETKRLLRE FWFYFSENRG AVIGLCVFLA LVLIAAFAPL LAPHSPTLQN
RDALLVPPFW EQGGNPSFLL GTDAVGRDIL SRLIFGARQS LFIGCVVVSI ALTGGIILGL
VAGFFGGWVD AVIMRVMDVI LAFPSLLLAL VMVAILGPGL TNAMIAIAIV LQPHFARLTR
AAVMAEKNRE YVMAARVAGA GRLRLMFRTI LPNCLAPLIV QGTLSFSNAV LDAAALGFLG
MGAQPPTPEW GTMLAEAREF ILRAWWVVTF PGLAILITVL AINLVGDGLR DALDPKLKRS
|
|---|
| |