More than 300 homologs were found in PanDaTox collection
for query gene Dgeo_3105 on replicon NC_009939
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009939  Dgeo_3105  ABC transporter, permease component  100 
 
 
294 aa  572  1.0000000000000001e-162  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_014213  Mesil_3393  binding-protein-dependent transport systems inner membrane component  64.01 
 
 
291 aa  338  7e-92  Meiothermus silvanus DSM 9946  Bacteria  normal  0.199241  normal  0.935882 
 
 
-
 
NC_013131  Caci_4985  binding-protein-dependent transport systems inner membrane component  45.91 
 
 
313 aa  233  3e-60  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00226923  hitchhiker  0.00373728 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
305 aa  209  6e-53  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0191  binding-protein-dependent transport systems inner membrane component  44.37 
 
 
317 aa  207  2e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.37513  normal 
 
 
-
 
NC_012850  Rleg_3429  binding-protein-dependent transport systems inner membrane component  41.4 
 
 
307 aa  205  9e-52  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  42.47 
 
 
316 aa  202  7e-51  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_011368  Rleg2_5350  binding-protein-dependent transport systems inner membrane component  38.89 
 
 
308 aa  201  9.999999999999999e-51  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.84186  normal  0.48209 
 
 
-
 
NC_014213  Mesil_3421  binding-protein-dependent transport systems inner membrane component  40.73 
 
 
307 aa  198  7.999999999999999e-50  Meiothermus silvanus DSM 9946  Bacteria  normal  0.556907  normal 
 
 
-
 
NC_014213  Mesil_3227  extracellular solute-binding protein family 1  40.73 
 
 
307 aa  198  7.999999999999999e-50  Meiothermus silvanus DSM 9946  Bacteria  decreased coverage  0.00159401  normal  0.987884 
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  37.8 
 
 
321 aa  195  9e-49  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  40.42 
 
 
309 aa  193  2e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  39.79 
 
 
313 aa  192  7e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  43.55 
 
 
316 aa  188  9e-47  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_011881  Achl_4622  binding-protein-dependent transport systems inner membrane component  41.24 
 
 
317 aa  188  9e-47  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  35.15 
 
 
314 aa  187  2e-46  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
293 aa  187  2e-46  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2365  sugar ABC transporter, permease protein  38.99 
 
 
288 aa  186  3e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.216835  normal 
 
 
-
 
NC_009939  Dgeo_2918  ABC-type sugar transport system, permease component  38.23 
 
 
305 aa  186  5e-46  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
315 aa  186  6e-46  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  38.28 
 
 
316 aa  185  8e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  38.57 
 
 
285 aa  182  6e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  37.24 
 
 
317 aa  181  1e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  37.5 
 
 
321 aa  180  2.9999999999999997e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  36.75 
 
 
296 aa  179  7e-44  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_010001  Cphy_3032  binding-protein-dependent transport systems inner membrane component  40.28 
 
 
307 aa  178  8e-44  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
296 aa  177  1e-43  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  34.6 
 
 
299 aa  178  1e-43  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
296 aa  178  1e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  36.88 
 
 
296 aa  177  2e-43  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
296 aa  177  2e-43  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  37.02 
 
 
305 aa  176  3e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  36.88 
 
 
306 aa  176  3e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  41.43 
 
 
317 aa  176  4e-43  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  38.03 
 
 
305 aa  176  6e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  36.17 
 
 
296 aa  175  7e-43  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  36.52 
 
 
296 aa  175  9e-43  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_013205  Aaci_0077  binding-protein-dependent transport systems inner membrane component  39.32 
 
 
311 aa  174  9.999999999999999e-43  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  36.23 
 
 
296 aa  175  9.999999999999999e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_011831  Cagg_0728  binding-protein-dependent transport systems inner membrane component  37.09 
 
 
313 aa  174  1.9999999999999998e-42  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.000239391  normal 
 
 
-
 
NC_010001  Cphy_1390  binding-protein-dependent transport systems inner membrane component  32.76 
 
 
308 aa  173  1.9999999999999998e-42  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  43.25 
 
 
306 aa  173  2.9999999999999996e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  40.48 
 
 
317 aa  172  3.9999999999999995e-42  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  37.15 
 
 
318 aa  172  5.999999999999999e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  34.62 
 
 
294 aa  171  1e-41  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  36.86 
 
 
314 aa  170  3e-41  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
307 aa  169  3e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_3848  binding-protein-dependent transport systems inner membrane component  38.46 
 
 
320 aa  169  4e-41  Nakamurella multipartita DSM 44233  Bacteria  normal  0.0230008  normal  0.429544 
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  35.76 
 
 
292 aa  169  4e-41  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
316 aa  169  6e-41  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3567  binding-protein-dependent transport systems inner membrane component  38.16 
 
 
309 aa  168  8e-41  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013526  Tter_2292  binding-protein-dependent transport systems inner membrane component  39.15 
 
 
306 aa  168  1e-40  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  36.91 
 
 
320 aa  167  1e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1315  ABC transporter, permease protein  37.96 
 
 
301 aa  167  2.9999999999999998e-40  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013205  Aaci_2047  binding-protein-dependent transport systems inner membrane component  36.18 
 
 
294 aa  166  2.9999999999999998e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.550241  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  35.61 
 
 
283 aa  166  5e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  32.4 
 
 
293 aa  165  6.9999999999999995e-40  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  36.96 
 
 
300 aa  165  6.9999999999999995e-40  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0620  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
305 aa  165  6.9999999999999995e-40  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000205165  n/a   
 
 
-
 
NC_012669  Bcav_1699  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
315 aa  165  8e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.258357  normal 
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  34.71 
 
 
321 aa  165  9e-40  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_1390  binding-protein-dependent transport systems inner membrane component  36.04 
 
 
308 aa  164  1.0000000000000001e-39  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  36.67 
 
 
317 aa  164  1.0000000000000001e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  32.29 
 
 
292 aa  164  1.0000000000000001e-39  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  35.44 
 
 
295 aa  164  1.0000000000000001e-39  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_2314  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
310 aa  164  1.0000000000000001e-39  Sinorhizobium medicae WSM419  Bacteria  normal  0.498676  normal  0.350334 
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  33.78 
 
 
321 aa  164  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
298 aa  163  2.0000000000000002e-39  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_2200  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
299 aa  164  2.0000000000000002e-39  Thermoanaerobacter sp. X514  Bacteria  normal  0.426381  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
314 aa  163  3e-39  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_012669  Bcav_3573  binding-protein-dependent transport systems inner membrane component  37.93 
 
 
353 aa  162  5.0000000000000005e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.500594  normal 
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
305 aa  162  6e-39  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_014151  Cfla_1127  binding-protein-dependent transport systems inner membrane component  37.73 
 
 
328 aa  162  7e-39  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.190953  hitchhiker  0.00155627 
 
 
-
 
NC_012669  Bcav_2718  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
330 aa  162  9e-39  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.21265 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
314 aa  161  1e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013526  Tter_2302  binding-protein-dependent transport systems inner membrane component  34.83 
 
 
320 aa  161  1e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.253823  n/a   
 
 
-
 
NC_011831  Cagg_2193  binding-protein-dependent transport systems inner membrane component  39.31 
 
 
306 aa  161  1e-38  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.692762  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  35.02 
 
 
300 aa  161  1e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3909  binding-protein-dependent transport systems inner membrane component  33.09 
 
 
305 aa  160  2e-38  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.172275 
 
 
-
 
NC_012669  Bcav_2602  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
306 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0924232  normal 
 
 
-
 
NC_013526  Tter_2496  binding-protein-dependent transport systems inner membrane component  34.97 
 
 
311 aa  160  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  37.88 
 
 
319 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0016  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
311 aa  160  2e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.17058  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  34.63 
 
 
309 aa  160  2e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_07100  carbohydrate ABC transporter membrane protein  37.1 
 
 
318 aa  159  4e-38  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.790586  normal 
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
316 aa  159  5e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_3242  binding-protein-dependent transport systems inner membrane component  32.39 
 
 
317 aa  159  6e-38  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  32.99 
 
 
324 aa  159  7e-38  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_2048  binding-protein-dependent transport systems inner membrane component  36.64 
 
 
332 aa  158  1e-37  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012848  Rleg_5053  binding-protein-dependent transport systems inner membrane component  34.47 
 
 
318 aa  158  1e-37  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0625824  normal 
 
 
-
 
NC_011981  Avi_7347  ABC transporter membrane spanning protein (sugar)  35.05 
 
 
320 aa  157  2e-37  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3074  sugar ABC transporter permease protein  35.87 
 
 
307 aa  157  2e-37  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.146884 
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
319 aa  157  2e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_012669  Bcav_1523  binding-protein-dependent transport systems inner membrane component  35.82 
 
 
321 aa  156  3e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  35.19 
 
 
295 aa  157  3e-37  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_011368  Rleg2_5336  binding-protein-dependent transport systems inner membrane component  34.98 
 
 
318 aa  156  3e-37  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.949955  normal 
 
 
-
 
NC_009486  Tpet_1680  binding-protein-dependent transport systems inner membrane component  35.94 
 
 
283 aa  157  3e-37  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000757089  n/a   
 
 
-
 
NC_013172  Bfae_29020  carbohydrate ABC transporter membrane protein  35.06 
 
 
275 aa  157  3e-37  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1668  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
310 aa  156  3e-37  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4319  binding-protein-dependent transport systems inner membrane component  34.55 
 
 
312 aa  156  3e-37  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.778687  hitchhiker  0.00185272 
 
 
-
 
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