Gene Dgeo_3105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_3105 
Symbol 
ID5687580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_009939 
Strand
Start bp195160 
End bp196044 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content64% 
IMG OID641262568 
ProductABC transporter, permease component 
Protein accessionYP_001527842 
Protein GI158421615 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAGCA GTGTGTTGGC CCGGCGGGAA GCTCGGGAAG GCTTCCTGTT CGCCCTGCCC 
TACCTGCTGG GCATGCTGAT CTTCGTACTG CTGCCCCTGG TGGCGATCCT GTGGATGTCC
CTGACCGGCT GGTCCCTGCT GGACGCGCCC ACCTTCAAGG GCTTCGCCAA CTACGCCAAA
TTGGCCCGCG ATCTGGAGTT CCGGGGCAGC CTAGGCATCA CCGCCGCCTT CACGGCGGGA
CTAGTGGCCC TGAACCTCAC GGTGGCCCTG CTACTCGCCA GCCTCTTGAA CGTGAAGCTG
CGCGGCATCG CCGCTTTCCG CTCGATGGTG TTCTCGCCGG TGGTGATGCC CATCGTGGCC
TGGTCGCTGA TCTGGAAGTT CCTCTTGCAG CCGCAGGGAC CGCTCAACAC GGGCCTCCAG
CACCTCGGGT TTCAGGACGC CAACCTGCTG CTGAACCCCA AAACAGCCCT GGGAACCCTG
ATCGTGATCG AGGTGCTGAA GGCCGTGGGA CTGAACACGA TGATCTTCTT GAGCGCCCTG
CAAGGCGTCC CGCCGGAGCA ACGCGAGGCC GCACGGCTTG ACGGTGCGAG TCCCTGGCAG
GTCTACCGCC ACGTCACGCT GCCGATGATC TCCCCTACCC TCTTTCTGGT GTTTCTGGTA
ACCGTCATCG GTGCCCTGAA GGTCTTCACG CCGATCTGGG TGCTCACGGG CGGCGGTCCG
GCGGGGGCAA CCACCACCCT GATTGTGGCA ATGTTCAAGC AGGGCTTTAC CTTCTTCGAG
TTCGGCTACG CCTCCGCGAT TGCGGCGGTG CTGTTCCTGG CCGTGCTGCT CCTCACGCTG
CTGCAATGGC GTCTGCGCAA GGCCTTGGTG TTCTATGAGG GCTGA
 
Protein sequence
MASSVLARRE AREGFLFALP YLLGMLIFVL LPLVAILWMS LTGWSLLDAP TFKGFANYAK 
LARDLEFRGS LGITAAFTAG LVALNLTVAL LLASLLNVKL RGIAAFRSMV FSPVVMPIVA
WSLIWKFLLQ PQGPLNTGLQ HLGFQDANLL LNPKTALGTL IVIEVLKAVG LNTMIFLSAL
QGVPPEQREA ARLDGASPWQ VYRHVTLPMI SPTLFLVFLV TVIGALKVFT PIWVLTGGGP
AGATTTLIVA MFKQGFTFFE FGYASAIAAV LFLAVLLLTL LQWRLRKALV FYEG