67 homologs were found in PanDaTox collection
for query gene BBta_3528 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_3528  3,4-dihydroxyphenylacetate 2,3-dioxygenase  100 
 
 		 305 aa  636    Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0958832  normal  1 
 
 
-
 
NC_008463  PA14_10620  homoprotocatechuate 2,3-dioxygenase  77.12 
 
 		 307 aa  484  1e-136  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_0968  homoprotocatechuate 2,3-dioxygenase  76.97 
 
 		 307 aa  484  1e-136  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_3169  3,4-dihydroxyphenylacetate 2,3-dioxygenase  74.33 
 
 		 309 aa  472  1e-132  Marinomonas sp. MWYL1  Bacteria  normal  0.567995  normal  1 
 
 
-
 
NC_010322  PputGB1_3499  3,4-dihydroxyphenylacetate 2,3-dioxygenase  77.11 
 
 		 307 aa  468  1.0000000000000001e-131  Pseudomonas putida GB-1  Bacteria  normal  0.242751  normal  1 
 
 
-
 
NC_010676  Bphyt_5827  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.53 
 
 		 287 aa  419  1e-116  Burkholderia phytofirmans PsJN  Bacteria  normal  0.121868  normal  0.292113 
 
 
-
 
NC_007952  Bxe_B2031  3,4-dihydroxyphenylacetate 2,3-dioxygenase(HpaD)  67.48 
 
 		 287 aa  414  9.999999999999999e-116  Burkholderia xenovorans LB400  Bacteria  normal  0.412165  normal  0.21533 
 
 
-
 
NC_011080  SNSL254_A1198  3,4-dihydroxyphenylacetate 2,3-dioxygenase  65.96 
 
 		 283 aa  389  1e-107  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  0.896873 
 
 
-
 
NC_012791  Vapar_0242  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.69 
 
 		 291 aa  388  1e-107  Variovorax paradoxus S110  Bacteria  normal  0.393613  n/a   
 
 
-
 
NC_011205  SeD_A1178  3,4-dihydroxyphenylacetate 2,3-dioxygenase  65.6 
 
 		 283 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011149  SeAg_B1062  3,4-dihydroxyphenylacetate 2,3-dioxygenase  65.6 
 
 		 283 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
-
 
NC_011094  SeSA_A1167  3,4-dihydroxyphenylacetate 2,3-dioxygenase  65.6 
 
 		 283 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.907464  normal  1 
 
 
-
 
NC_011083  SeHA_C1213  3,4-dihydroxyphenylacetate 2,3-dioxygenase  65.6 
 
 		 283 aa  388  1e-107  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.343521  normal  0.923917 
 
 
-
 
NC_009832  Spro_0628  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.54 
 
 		 285 aa  385  1e-106  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
CP001509  ECD_04228  Homoprotocatechuate dyoxygenase  64.54 
 
 		 283 aa  383  1e-105  Escherichia coli BL21(DE3)  Bacteria  normal  1  n/a   
 
 
-
 
NC_010658  SbBS512_E4888  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.54 
 
 		 283 aa  383  1e-105  Shigella boydii CDC 3083-94  Bacteria  normal  1  n/a   
 
 
-
 
NC_009800  EcHS_A4582  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.54 
 
 		 283 aa  383  1e-105  Escherichia coli HS  Bacteria  normal  1  n/a   
 
 
-
 
NC_012892  B21_04194  hypothetical protein  64.54 
 
 		 283 aa  383  1e-105  Escherichia coli BL21  Bacteria  normal  1  n/a   
 
 
-
 
NC_010468  EcolC_3704  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.54 
 
 		 283 aa  383  1e-105  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.17743 
 
 
-
 
NC_010682  Rpic_1957  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.72 
 
 		 289 aa  370  1e-101  Ralstonia pickettii 12J  Bacteria  normal  0.116994  normal  0.0908545 
 
 
-
 
NC_009708  YpsIP31758_2362  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.48 
 
 		 285 aa  367  1e-100  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010465  YPK_2458  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.13 
 
 		 285 aa  365  1e-100  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1629  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.72 
 
 		 289 aa  367  1e-100  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.405042 
 
 
-
 
NC_010159  YpAngola_A1645  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.48 
 
 		 285 aa  363  1e-99  Yersinia pestis Angola  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007650  BTH_II1732  3,4-dihydroxyphenylacetate 2,3-dioxygenase  63.12 
 
 		 282 aa  361  1e-98  Burkholderia thailandensis E264  Bacteria  normal  0.157568  n/a   
 
 
-
 
NC_007511  Bcep18194_B1780  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  62.19 
 
 		 282 aa  360  2e-98  Burkholderia sp. 383  Bacteria  normal  1  normal  0.112809 
 
 
-
 
NC_010552  BamMC406_4130  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.84 
 
 		 282 aa  358  9e-98  Burkholderia ambifaria MC40-6  Bacteria  normal  0.225461  normal  1 
 
 
-
 
NC_010086  Bmul_4371  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  357  1.9999999999999998e-97  Burkholderia multivorans ATCC 17616  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008835  BMA10229_0103  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia mallei NCTC 10229  Bacteria  normal  0.547527  n/a   
 
 
-
 
NC_006349  BMAA1137  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_010515  Bcenmc03_3283  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.35 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.225438  normal  0.128816 
 
 
-
 
NC_007435  BURPS1710b_A2267  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_009079  BMA10247_A1510  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia mallei NCTC 10247  Bacteria  normal  0.134122  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0941  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia pseudomallei 1106a  Bacteria  normal  1  n/a   
 
 
-
 
NC_009075  BURPS668_A1026  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.41 
 
 		 282 aa  356  2.9999999999999997e-97  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_4132  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  61.35 
 
 		 282 aa  355  6.999999999999999e-97  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0541165  n/a   
 
 
-
 
NC_008543  Bcen2424_4234  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.35 
 
 		 282 aa  355  6.999999999999999e-97  Burkholderia cenocepacia HI2424  Bacteria  normal  0.128738  normal  0.0818305 
 
 
-
 
NC_008391  Bamb_3656  3,4-dihydroxyphenylacetate 2,3-dioxygenase  61.13 
 
 		 282 aa  354  1e-96  Burkholderia ambifaria AMMD  Bacteria  normal  1  normal  0.492492 
 
 
-
 
NC_007778  RPB_3868  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  47.2 
 
 		 283 aa  241  1e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  1  normal  0.90869 
 
 
-
 
NC_011004  Rpal_1859  3,4-dihydroxyphenylacetate 2,3-dioxygenase  46.5 
 
 		 283 aa  231  1e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.758455  n/a   
 
 
-
 
NC_013595  Sros_7520  3,4-dihydroxyphenylacetate 2,3-dioxygenase  44.33 
 
 		 285 aa  230  3e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  0.261436  normal  1 
 
 
-
 
NC_013595  Sros_7503  putative dioxygenase  28.76 
 
 		 307 aa  99.8  5e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013411  GYMC61_2301  Extradiol ring-cleavage dioxygenase class III protein subunit B  24.73 
 
 		 284 aa  98.2  2e-19  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1623  Extradiol ring-cleavage dioxygenase class III protein subunit B  28.92 
 
 		 269 aa  92.4  9e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007794  Saro_2607  extradiol ring-cleavage dioxygenase III subunit B  28.72 
 
 		 290 aa  87.4  3e-16  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_1101  extradiol ring-cleavage dioxygenase III subunit B  26.13 
 
 		 303 aa  83.6  0.000000000000004  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.31891 
 
 
-
 
NC_009078  BURPS1106A_A0233  aromatic ring-opening dioxygenase  27.5 
 
 		 308 aa  77  0.0000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.329446  n/a   
 
 
-
 
NC_009075  BURPS668_A0323  aromatic ring-opening dioxygenase  27.5 
 
 		 308 aa  77  0.0000000000004  Burkholderia pseudomallei 668  Bacteria  normal  1  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1686  putative dioxygenase  27.5 
 
 		 308 aa  77  0.0000000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  1  n/a   
 
 
-
 
NC_007650  BTH_II0234  class III extradiol-type catecholic dioxygenase, putative  27.94 
 
 		 338 aa  75.1  0.000000000001  Burkholderia thailandensis E264  Bacteria  normal  1  n/a   
 
 
-
 
NC_006349  BMAA1919  putative class III extradiol-type catecholic dioxygenase  27.5 
 
 		 308 aa  74.7  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  1  n/a   
 
 
-
 
NC_008835  BMA10229_1220  aromatic ring-opening dioxygenase  27.5 
 
 		 308 aa  74.7  0.000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.432018  n/a   
 
 
-
 
NC_008784  BMASAVP1_0934  aromatic ring-opening dioxygenase  27.5 
 
 		 308 aa  74.7  0.000000000002  Burkholderia mallei SAVP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010424  Daud_0337  hypothetical protein  25.25 
 
 		 470 aa  60.5  0.00000003  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.219744  n/a   
 
 
-
 
NC_010501  PputW619_2014  extradiol ring-cleavage dioxygenase class III protein subunit B  24.42 
 
 		 305 aa  53.1  0.000005  Pseudomonas putida W619  Bacteria  normal  1  normal  0.523696 
 
 
-
 
NC_013204  Elen_1695  hypothetical protein  26.88 
 
 		 474 aa  52.8  0.000006  Eggerthella lenta DSM 2243  Bacteria  normal  1  normal  0.90048 
 
 
-
 
NC_007951  Bxe_A1145  2-aminophenol 1,6-dioxygenase, beta subunit  23.88 
 
 		 304 aa  51.2  0.00002  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_1065  hypothetical protein  22.94 
 
 		 468 aa  50.8  0.00002  Thermoanaerobacter sp. X514  Bacteria  normal  0.710418  n/a   
 
 
-
 
NC_013216  Dtox_0324  hypothetical protein  21.46 
 
 		 467 aa  50.4  0.00004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.627251  normal  1 
 
 
-
 
NC_009253  Dred_0269  hypothetical protein  23.89 
 
 		 467 aa  50.1  0.00005  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE2449  hypothetical protein  25.13 
 
 		 468 aa  48.9  0.0001  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_2953  catalytic LigB subunit of aromatic ring-opening dioxygenase  23.18 
 
 		 277 aa  46.2  0.0008  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.66937  normal  1 
 
 
-
 
NC_007951  Bxe_A1146  2-aminophenol 1,6-dioxygenase, alpha subunit  20.42 
 
 		 270 aa  44.3  0.003  Burkholderia xenovorans LB400  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_0840  Extradiol ring-cleavage dioxygenase class III protein subunit B  24.68 
 
 		 279 aa  42.7  0.007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_02480  Extradiol ring-cleavage dioxygenase class III protein subunit B  23.84 
 
 		 275 aa  42.7  0.007  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000000384928  n/a   
 
 
-
 
NC_011899  Hore_01530  Extradiol ring-cleavage dioxygenase class III protein subunit B  23.84 
 
 		 275 aa  42.7  0.007  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000710053  n/a   
 
 
-
 
NC_013165  Shel_17380  hypothetical protein  21.59 
 
 		 481 aa  42.7  0.008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>