Gene Bcen2424_4234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen2424_4234 
Symbol 
ID4451268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia HI2424 
KingdomBacteria 
Replicon accessionNC_008543 
Strand
Start bp1167491 
End bp1168339 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content65% 
IMG OID639696291 
Product3,4-dihydroxyphenylacetate 2,3-dioxygenase 
Protein accessionYP_837862 
Protein GI116692329 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.128738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0818305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAC TGTCCCTCGC CGCGAAGATC ACGCACGTGC CGTCGATGTA CCTGTCGGAA 
CTGCCCGGCA AGCATCACGG CTGCCGTGAA GCGGCGATCC GCGGCCACCA GCTGATCGGC
GAGCGCTGCC GCGCGCTCGG CGTCGACACG ATCGTCGTGT CGGACGTGCA CTGGCTCGTC
AACGCCGGCT ATCACGTGAA CTGCAATGCG CGGTTCGCGG GCACCTATAC GAGCAACGAG
CTGCCGCATT TCATCCGCGA CATGCAGTAC GCGTATCCGG GCAACCCGGC GCTCGGCCGG
CTGATCGCGG AAACGGCCAC CGAGCGCGGC GTCGCGACGC GTGCGCACGA AATCGACAGC
CTCGAGCTCG AATACGGCAC GCTCGTGCCG ATGCGCTACA TGAACGGCGA CCAGCACTTC
AAGGTCGTGT CGATTGCCGG CTGGTGCATG TGGCATCAGC TCGACGAAAG CCGGCGCTTC
GGCGAGGCGC TGCTCGAGGC GATCGAGAAG AGCGATTCGA ACGTCGCGTT CCTCGCGAGT
GGCTCGCTGT CGCACCGCTT CAACGACAAC GGCAGCCCCG AGGAATCGAT TCACCAGATC
AGCCGCGAAT TCTTCCGGCA GGTCGACCTG CGCGTGGTCG AGCTGTGGAA GCAGGGCGAT
TTCAAGACCT TCTGCGCGAT GCTGCCCGAA TACAACGTGC ATTGCCACGG CGAAGGCGGC
ATGCACGACA CGGCGATGCT GCTCGGGCTG CTCGGCTGGG ATCGCTACGA CAAGCCGGTC
GAGATCGTCA CCGACTATTT CGCGAGTTCC GGCACCGGGC AGATCAACGC GATCTTCCCG
CTGCCCTGA
 
Protein sequence
MGKLSLAAKI THVPSMYLSE LPGKHHGCRE AAIRGHQLIG ERCRALGVDT IVVSDVHWLV 
NAGYHVNCNA RFAGTYTSNE LPHFIRDMQY AYPGNPALGR LIAETATERG VATRAHEIDS
LELEYGTLVP MRYMNGDQHF KVVSIAGWCM WHQLDESRRF GEALLEAIEK SDSNVAFLAS
GSLSHRFNDN GSPEESIHQI SREFFRQVDL RVVELWKQGD FKTFCAMLPE YNVHCHGEGG
MHDTAMLLGL LGWDRYDKPV EIVTDYFASS GTGQINAIFP LP