| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_3528 |
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| Symbol | hpcB |
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| ID | 5151207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 3680921 |
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| End bp | 3681838 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640558380 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001239527 |
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| Protein GI | 148254942 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0958832 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAAGC TCGCACTGGC GGCGAAGATC ACACACGTGC CGTCGATGTA TCTCAGCGAG
CTCGATGGTC CGGCCAAGGG CAAGCGCCAG TCGGCGATCG ATGGCCATAT CGAGATCGGC
CGGCGTTGCC GCGAGGCGGG CGTCGACACG ATCGTCGTGT TCGACACCCA CTGGCTGGTC
AATGCGGGCT ACCACATCAA CTGCGCGCCG CATTTCCAGG GACTCTACAC CTCCAACGAG
CTGCCGCACT TCATTGCCAA CATGACCTAT GAGTATGACG GCAACCCGGA GCTTGGCCGC
ATCCTGGCCG AGGGGGCCAA TGCCCATGGC ATCGCCACCA TGGCCCATGC GGCCACGTCG
CTGGCGCTCG AATACGGGAC CCTGGTGCCG ATGCGCTACA TGAATGCCGA TCGCCATTTC
AAGGTGGTGT CGGTATCGGC GCTCTGCACC TCGCATTACC TCGCCGACAG CGCCAAGCTC
GGCTGGGCAT TCCGCCGTGC GGTCGAGGAT CATTACGATG GCACGGTGGC CTTCTTCGCG
TCGGGCTCCC TGAGCCACCG CTTCGCGCAG AACGGCACCG CCGACGAATA TCGCGACAAG
ATGTTCAGCC CGTTCCTCGA GCGTCTCGAC CACGAGGTGA TCCAGATGTG GGAGCAGGGT
GAATGGCCCG ACTTCTGCGA CATGCTGCCG GAATATGCCA GCAAGGGTCA TGGCGAGGGC
TTCATGCACG ACACCGCGAT GCTGCTCGGT GCGCTCGGCT GGAACCATTA CGACCGCGGC
GTCGAGGTGG TCACGCCGTT CTTTCCCTCG TCGGGGACCG GTCAGATCAA CGCGGTGTTT
CCGGTGTCGC CGATGCCGCA GGCGCTCGCG GACATCGGCC GGCCGCGCGC CGCGGCGCTT
GCGGGGGGAC GGCTGTAG
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| Protein sequence | MGKLALAAKI THVPSMYLSE LDGPAKGKRQ SAIDGHIEIG RRCREAGVDT IVVFDTHWLV
NAGYHINCAP HFQGLYTSNE LPHFIANMTY EYDGNPELGR ILAEGANAHG IATMAHAATS
LALEYGTLVP MRYMNADRHF KVVSVSALCT SHYLADSAKL GWAFRRAVED HYDGTVAFFA
SGSLSHRFAQ NGTADEYRDK MFSPFLERLD HEVIQMWEQG EWPDFCDMLP EYASKGHGEG
FMHDTAMLLG ALGWNHYDRG VEVVTPFFPS SGTGQINAVF PVSPMPQALA DIGRPRAAAL
AGGRL
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