| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_0242 |
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| Symbol | |
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| ID | 7971451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 258018 |
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| End bp | 258893 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644790845 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_002942171 |
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| Protein GI | 239813261 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.393613 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCACCC TCGCACTCGC CGCCAAGATC ACGCATGTGC CGTCGATGTA CCTCTCGGAG
TTCCCGGGAC CGAACTTCGG CTGCCGCGAC GCGGCGATCA ACGGCCACAA GGAAATCGAC
CGGCGCTGCC GCGCGCTGGG CGTGGACACC ATCGTGGTGT TCGACGTGCA CTGGCAGGTC
AACAGCGAAT ACCACATCAA CTGCGGCCCG AAGTTCGGCG GCACCTACAC CAGCAACGAG
CTGCCGCACT TCATCAAGAA CATGCCGTAC GCCTACCCGG GCAACCCGGC TCTGGGCCAC
CTGATTGCCG ACGTGGCGAA CGAAATGGGC GTGAAGAGCC GCGCGCACAG CGACACCACG
CTCGAACTCG AATACGGCAC GCTGGTGCCC ATGCGCTACA TGAACGCCGA CCAGCACTAC
AAGGTGATCA GCATCAGCGG CTGGTGCGAC TGGCACGACC TCACGGAGTC GGGCCGCTTC
GGCCTGGCGG TGCGGCGCGC GATCGAGGAG CGCTACGAGG GCACGGTGGC GGTGTTCGCG
AGCGGTTCGC TCTCGCACCA CTTCGCGGAC AACGGCCGCG CCCCCGAATT CATGCACAAG
GTCTACGATC CCTTCCTCGA GCAGGTGGAC CGCCGCGTGG TCGAGCTCTG GGAGGCCGGC
GACTGGAAGA CCTTCGTCGG CATGCTGCCG ATGTACGCCG ACAAGTGCTG GGGCGAAGGC
GACATGCACG ACACCGCGAT GCTGCTGGGC CTCCTGGGTT GGGACCGCTA CGCCGCGCCG
GTGGAAGTGG TCACGCCCTA TTTCGGGAGC TCGGGCACGG GGCAGATCAA TGCGATCTTT
CCCGTGACGC CACTGCCTGC GGAAACCACC ACCTGA
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| Protein sequence | MGTLALAAKI THVPSMYLSE FPGPNFGCRD AAINGHKEID RRCRALGVDT IVVFDVHWQV
NSEYHINCGP KFGGTYTSNE LPHFIKNMPY AYPGNPALGH LIADVANEMG VKSRAHSDTT
LELEYGTLVP MRYMNADQHY KVISISGWCD WHDLTESGRF GLAVRRAIEE RYEGTVAVFA
SGSLSHHFAD NGRAPEFMHK VYDPFLEQVD RRVVELWEAG DWKTFVGMLP MYADKCWGEG
DMHDTAMLLG LLGWDRYAAP VEVVTPYFGS SGTGQINAIF PVTPLPAETT T
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