Gene TDE2449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTDE2449 
Symbol 
ID2739634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameTreponema denticola ATCC 35405 
KingdomBacteria 
Replicon accessionNC_002967 
Strand
Start bp2477550 
End bp2478956 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content40% 
IMG OID637161342 
Producthypothetical protein 
Protein accessionNP_973048 
Protein GI42527950 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein
[COG3885] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA AAGAGCTTTG TTCAAAAGAT ACTAATCTAA GGGCTGCATA TATCACCCCT 
CATCCTCCGA TTATAATTCC CGAGATAGGC AGGGGAGAGG AGAAAAAAAT AGCTTCAACT
TCTAAGGCTC TTAAAACCAT ATCGAAAGAA GTAAAGCAAA TAGAACCTGA AACTATTATA
ATCATAACTC CACATGCAAA AATGCACCGA GGGGCAGTTA CAATAAATAC GGCTCCGGTT
ATCGAAGGAA CTATGGCTCA ATTCGGTTGT CCCGATTTGC GTTTTTCAGC AAAAAACGAT
GAGCGGATTG TAAAAGAAAT AATCAAAAAA TGCAAAAAGA CAGGCTTCCC TTATGCGGCT
GTAGATATGA ATCTAGATCA CGGCTCCTTT GTTCCGCTTT ATTTTATAAG CTCAGAGTTT
TCAAATTTTT CTCTTGTGCA TATAAATTAC GGAATTATGT TGAGTGCAAT GCTTGAAGAA
TTCGGGTCAA TTCTTTCCGA TATTATTGAA GAAAAAAAAT GCAAATCTGT TTTTATTGCG
AGCGGAGATC TTTCACATCG GCTTCTTTCT ACAGGCCCTT ACGGTTTTGC TCCTGAAGGA
CCCAAATTCG ATAAGGAATT TGTAAGAATT ATAGAAAAGG GAAGCCTTTC CGAATTTGCC
GATATTCCTC CTTTGCTTAC CGAAAGGGCG GGGGAGTGCG GTCTTAATTC TTTTTTAATT
TTGTCGGGGC TTTTATCCTG TTATAAACAT TCTCAAGAGC TGCTTTCCTA CGAGGGTCCC
TTTGGAGTCG GATACGGTGT TGCTCGATTT AAGGTTAAAT CTATAAGACA GCCGGAAGAT
GAGGACTTAG AGATTGTTTT TAAAGAAAAA AAGAAGAAAT TTATATTGCC CGATTCGCAA
ACAAATGACC CTTATATAAA TCTTGCACGC AGGAGTATTA TCTACTATTT AAAGCATAAT
AAGTTTTTAA AACCTAAGAA TACCGATGGT ATTCAATCGG GAAAGGCCGG CGTTTTTGTA
TGCTTAAAGA AAAAAGGGGA GCTTAGAGGA TGTATAGGTA CAATACTTCC TACCAAAAGC
CGCATAAGTG AAGAGATAAT TAAAAATGCA GTATCGGCAG CCTTGAATGA CCCACGGTTT
CCGCCCGTCG ATTTATCCGA AATGGACGAA ATTGTCTGTT CTGTCGATAT TCTTGCAGAA
CCGGAAGAAA TAAAATCGAT TTCGGATTTG GATGTAAAGC GTTTCGGTGT GATAGTCTCA
TCGGGTTCGA GGACCGGACT TCTTTTACCC AACCTTGAAG GTATCGATTC CGTCGGTATG
CAGGTCGCCA TAGCTCTTCA AAAAGGCGGA ATAAGCCCCG AAGAACCTTA CCGCATGTAC
CGCTTTGAAG TTATAAGGCA TGAGTAA
 
Protein sequence
MRKKELCSKD TNLRAAYITP HPPIIIPEIG RGEEKKIAST SKALKTISKE VKQIEPETII 
IITPHAKMHR GAVTINTAPV IEGTMAQFGC PDLRFSAKND ERIVKEIIKK CKKTGFPYAA
VDMNLDHGSF VPLYFISSEF SNFSLVHINY GIMLSAMLEE FGSILSDIIE EKKCKSVFIA
SGDLSHRLLS TGPYGFAPEG PKFDKEFVRI IEKGSLSEFA DIPPLLTERA GECGLNSFLI
LSGLLSCYKH SQELLSYEGP FGVGYGVARF KVKSIRQPED EDLEIVFKEK KKKFILPDSQ
TNDPYINLAR RSIIYYLKHN KFLKPKNTDG IQSGKAGVFV CLKKKGELRG CIGTILPTKS
RISEEIIKNA VSAALNDPRF PPVDLSEMDE IVCSVDILAE PEEIKSISDL DVKRFGVIVS
SGSRTGLLLP NLEGIDSVGM QVAIALQKGG ISPEEPYRMY RFEVIRHE