| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_5827 |
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| Symbol | |
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| ID | 6278540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010676 |
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| Strand | + |
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| Start bp | 2031050 |
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| End bp | 2031913 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642616891 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001889534 |
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| Protein GI | 187920502 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.121868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.292113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCAAAC TCGCGCTGGC AGCAAAAGTG ACTCACGTCC CGTCGTTATA TCTGTCCGAA
CTCGACGGTC CGCATAAAGG CTGCCGTCAG CCGGCTATCG ACGGCCATCA TGAAATCGGC
CGGCGTTGCC GCGAACTCGG CGTGGATACG ATCGTCGTGT TCGACGTGCA TTGGCTCGTG
AACAGCGAAT ACCACATCAA TTGCGCGCCG AAATTCGAAG GCGTCTACAC GAGCAACGAG
CTGCCGCATT TCATCAAGAA CATGCCGTAC GCGTATCCGG GCAATGTGGA ACTCGGCAAT
CTGATCGCGG AAGTCGCCAA CGAAATGGGC GTGAAAAGCC GCGCGCACAG CGAGACCACT
CTCGAACTCG AATACGGCAC GCTGGTGCCG ATGCGTTATA TGAATGGCGA TCAGCATTTC
AAGACCGTCT CGGTAGCGGG CTGGTGCATG TGGCACGACC TCGACACCAG TGCGCGCTTC
GGCCTCGCGG TGCGCAAGGC CATCGAAGAG CGTTATGACG GCACCGTGGC GATTCTGGCG
AGCGGATCGC TCAGCCACCA CTTCGCCAAC AACGGCACGG CCGAGCAGTT CATGCACAAG
GTGTGGAGTC CGTTTCTCGA ACAGATGGAC CGCAAGGTGG TCGAATTGTG GGAAGCCGGC
GACTGGAAAA CCTTCTGCGA GATGCTGCCG CTCTACAACG AAAAATGCTG GGGCGAAGGC
GGCATGCACG ACACCGCGAT GCTGCTCGGC GCGCTTGGCT GGGACCGATA CGACGGCAAG
GCGGAAGTCG TCACGCCGTA TTTCGGCAGT TCGGGCACCG GCCAGATCAA CGCGATCTTC
CCCGTTACGC CGCTACCCGC CTGA
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| Protein sequence | MGKLALAAKV THVPSLYLSE LDGPHKGCRQ PAIDGHHEIG RRCRELGVDT IVVFDVHWLV
NSEYHINCAP KFEGVYTSNE LPHFIKNMPY AYPGNVELGN LIAEVANEMG VKSRAHSETT
LELEYGTLVP MRYMNGDQHF KTVSVAGWCM WHDLDTSARF GLAVRKAIEE RYDGTVAILA
SGSLSHHFAN NGTAEQFMHK VWSPFLEQMD RKVVELWEAG DWKTFCEMLP LYNEKCWGEG
GMHDTAMLLG ALGWDRYDGK AEVVTPYFGS SGTGQINAIF PVTPLPA
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