| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_A1686 |
|---|
| Symbol | |
|---|
| ID | 3693618 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007435 |
|---|
| Strand | + |
|---|
| Start bp | 2056502 |
|---|
| End bp | 2057428 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637731940 |
|---|
| Product | putative dioxygenase |
|---|
| Protein accession | YP_336843 |
|---|
| Protein GI | 76819023 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGA TCGTCGGCGC CGGGCTCATT TCGCACGCGC CCGTCGTGAT GATGCCGCAG
GCCGTGCGGC TGCGCGAAAA CGGCGGCCGG GACTTCACGC TCGCAACCGG CCTCGCCCGG
TTGCGGCGCG ACGTGTTCGA CGCGCACGAT TACGATACGG TGCTCGTTTT CGACAGCCAT
TGGCTCACGA CGACCGAAGC GGTGGTCACC GCGCATGCGC GGCGCGCGGG CCGCTTCACG
TCGGACGAGA TGCCGAACGC GATCCGGCAA CTGCCATACG ATCTGGCGGG CGACCCGGCG
CTCGCGCATG CGATCGCCGA GCAGGCGCGG CGGCGTGCGT CGTGGATCGA CGCGGTGGAC
GACCCGTGCC TGCCGCTGCA CTACGCGACG CTCAATCCGT GGACCTATCT CGGCCGCCCG
GACAAGCGCT GGCTTTCCGT CTCCGTGTGC CAGACCGCGA CGACCGAGGA TTTCCTGCGG
ATGGGCGAAA CCGTCGCGCA GGCGATCGCG CAGCTCGAGC GCAAGGTGCT GCTCGTCGCG
TCGGGCGGCC TGTCGCATGC GTTCTGGCCG CTCGCCGAGC TGCGCGGGCG GATGGCGGGC
GCGGCGTCGA ACATCGTCAC GCCCGCCGCG CGCGCGGCGG ACGAGCGGCG GATCGCGTGG
CTCGAGCAAG GGCGGCACGA CCGGGTGATC GACGCGATGC CGGAATTCCT GCGCTTCGCG
CCGGAGGCGA ACTTCGGCCA CTACCTGATG ATGGCGGGCG CGCTCGGCGC GCGCGCGTGC
GCGGCGCGTG CACGCCGCTT CAGCGAGTAC GAGAACGGCA TCGGCACCGG GCACGTCCAT
CTGTGGTTCA GTCCCGCCGA CGGCGGATGG GCGCGGGCCG AAACGCACAA CGAACGGCGC
ACCGAAACGG ACGCGGCGAG CGCTTGA
|
|---|
| Protein sequence | MGKIVGAGLI SHAPVVMMPQ AVRLRENGGR DFTLATGLAR LRRDVFDAHD YDTVLVFDSH
WLTTTEAVVT AHARRAGRFT SDEMPNAIRQ LPYDLAGDPA LAHAIAEQAR RRASWIDAVD
DPCLPLHYAT LNPWTYLGRP DKRWLSVSVC QTATTEDFLR MGETVAQAIA QLERKVLLVA
SGGLSHAFWP LAELRGRMAG AASNIVTPAA RAADERRIAW LEQGRHDRVI DAMPEFLRFA
PEANFGHYLM MAGALGARAC AARARRFSEY ENGIGTGHVH LWFSPADGGW ARAETHNERR
TETDAASA
|
|---|
| |