| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_0968 |
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| Symbol | hpaD |
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| ID | 5355698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 968071 |
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| End bp | 968994 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640810022 |
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| Product | homoprotocatechuate 2,3-dioxygenase |
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| Protein accession | YP_001346354 |
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| Protein GI | 152988794 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAAG TCGCTCTGGC TGCCAAGATC ACCCACGTAC CCTCGCTGTA CCTGTCCGAG
CTGCCCGGCC CGCGCCACGG CTGCCGCCAG CCGGCGATCG ACGGGCACCG CGAGATCGGC
CGGCGCTGCC GCGAACTGGG GGTCGACACC ATCGTGGTGT TCGACACCCA CTGGCTGGTC
AACGCCGGCT ACCACATCAA CTGCGCGCCG CACTTCGAGG GGCTCTACAC CAGCAACGAG
CTGCCGCACT TCATCGCCAA CATGGAGTAC GGTTTCCCCG GCAACCCGGA GCTGGGCCGC
ATCCTCGCCG AGGGCTGCAA CGCACTCGGC GTGGAGACCC TGGCCCACGA CGCCACCACC
CTCGGCCCGG AGTACGGCAC CCTGGTACCG ATGCGCTACA TGAACCAGGA CCGCCACTTC
AAGGTGGTCT CGGTCTCCGC CCTGTGCACC GTGCATTACC TGAACGACAG CGCGCGCCTG
GGCTGGGCCA TGCGCAAGGC GGTGGAGGAA CACTACGACG GCACGGTGGC GTTCCTCGCC
AGCGGCTCGC TGTCCCACCG CTTCGCCCAG AACGGCCAGG CGCCGGACTT CTCCGACCGC
ATCTGGAGCC CGTTCCTCGA GGTCCTCGAC CATGAAGTCG TGCAGATGTG GCAGGAGGGC
CGCTGGGCCG AGTTCTGCGG GATGCTCCCG GAGTACGCCT CCAAGGGCCA TGGCGAAGGT
TTCATGCACG ACACCGCGAT GCTCCTCGGT GCCCTCGGCT GGTCGGACTA CGACGGCAAG
GCGGAGGTGG TGACGCCCTA CTTCGGCTCC TCCGGCACCG GGCAGATCAA CGCGGTCTTC
CCGGTCACCG CCCAGGACGG CGCGGCGATC CCCGCCGCCC AGGCCGGCAA CCCGGCCGGC
GCCAGCTGCG CCAGTCGCCT CTGA
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| Protein sequence | MGKVALAAKI THVPSLYLSE LPGPRHGCRQ PAIDGHREIG RRCRELGVDT IVVFDTHWLV
NAGYHINCAP HFEGLYTSNE LPHFIANMEY GFPGNPELGR ILAEGCNALG VETLAHDATT
LGPEYGTLVP MRYMNQDRHF KVVSVSALCT VHYLNDSARL GWAMRKAVEE HYDGTVAFLA
SGSLSHRFAQ NGQAPDFSDR IWSPFLEVLD HEVVQMWQEG RWAEFCGMLP EYASKGHGEG
FMHDTAMLLG ALGWSDYDGK AEVVTPYFGS SGTGQINAVF PVTAQDGAAI PAAQAGNPAG
ASCASRL
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