| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcHS_A4582 |
|---|
| Symbol | hpaD |
|---|
| ID | 5592868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli HS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009800 |
|---|
| Strand | - |
|---|
| Start bp | 4590509 |
|---|
| End bp | 4591360 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640923676 |
|---|
| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
|---|
| Protein accession | YP_001461116 |
|---|
| Protein GI | 157163798 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3384] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 75 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAAGT TAGCGTTAGC CGCCAAGATC ACGCACGTAC CGTCGATGTA TCTCTCTGAA
CTGCCAGGGA AAAACCACGG TTGCCGCCAG GGCGCGATCG ACGGGCATAA AGAGATCAGC
AAGCGTTGCC GGGAAATGGG CGTCGATACC ATTATCGTTT TCGATACCCA CTGGCTGGTC
AACAGTGCTT ATCACATCAA CTGTGCAGAC CATTTTGAAG GCGTCTACAC CAGCAACGAG
CTGCCGCATT TTATCCGCGA TATGACCTAC AACTACGAGG GCAACCCGGA GTTGGGGCAG
CTTATTGCCG ATGAAGCCTT AAAGCTCGGC GTGCGGGCAA AAGCGCACAA CATTCCCAGC
CTGAAACTGG AATACGGCAC GCTGGTGCCA ATGCGCTACA TGAATGAAGA CAAGCACTTC
AAAGTGGTTT CCATTTCAGC TTTCTGCACT GTTCACGATT TTGCCGACAG CCGCAAGCTG
GGCGAGGCGA TTCTGAAAGC GATCGAACAG TACGACGGCA CCGTGGCGGT CCTTGCCAGC
GGTTCGTTAT CGCACCGCTT TATTGACGAT CAGCGAGCGG AAGAAGGGAT GAACAGCTAC
ACCCGCGAGT TCGACCGCCA GATGGACGAG CGTGTGGTGA AGCTGTGGCG CGAAGGCCAG
TTCAAAGAGT TCTGCAATAT GCTGCCGGAG TACGCCGACT ACTGCTACGG CGAAGGCAAT
ATGCACGACA CGGTGATGCT GCTGGGGATG CTCGGCTGGG ATAAATACGA CGGCAAGGTG
GAGTTTATCA CCGAGCTATT CCCAAGCTCT GGCACCGGTC AGGTTAACGC TGTTTTCCCG
CTTCCCGCGT AA
|
|---|
| Protein sequence | MGKLALAAKI THVPSMYLSE LPGKNHGCRQ GAIDGHKEIS KRCREMGVDT IIVFDTHWLV
NSAYHINCAD HFEGVYTSNE LPHFIRDMTY NYEGNPELGQ LIADEALKLG VRAKAHNIPS
LKLEYGTLVP MRYMNEDKHF KVVSISAFCT VHDFADSRKL GEAILKAIEQ YDGTVAVLAS
GSLSHRFIDD QRAEEGMNSY TREFDRQMDE RVVKLWREGQ FKEFCNMLPE YADYCYGEGN
MHDTVMLLGM LGWDKYDGKV EFITELFPSS GTGQVNAVFP LPA
|
|---|
| |