| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1859 |
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| Symbol | |
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| ID | 6409518 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1996630 |
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| End bp | 1997481 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711747 |
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| Product | 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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| Protein accession | YP_001990860 |
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| Protein GI | 192290255 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.758455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGC TGGTACTGGC GGCCAAAGTC AGTCACGTCC CCTCACTGAT GCTGTCGGAG
ACCTCCGAAA GTCCGCTACG TCAGGCACGG GCGGGCGCCG TCGCGGCGCT ACGCGAACTT
GGACGTCGCG CAAAAGAGCG CGAGGTCACC ACCTTTGTGG TGTTCGACAC CCACTGGCTG
TCGAACTTCG GCTATCACAT CAACGCCAAT GCGCAGCACC GCGGCTCGTT CACCAGCCAC
GAAGCGCCGC ACATGATCCA GGACCTGCGC TACGACCTGC CGGGCGATCC GGCCTTAGCG
CAGGCGATCG CCGCCGAGGC ACAGAGTCAC GGATTGAAGG TCCTGGCGCA TCAGGTGCCG
ACGCTCGGGC TTGAATACGG CACGATCGTG CCGATGCACT ATCTCAATCC CGACGGCTGG
GCGAAGGTCG TCTCGATTGC TTCGCCACTG TTCACTTCGA TCGAGGAGAG CCGCGCACTC
GGTGAAGCCA CCCGCCACGC GATCGATGCC TCCGACGAAC GCGTCGCGAT CCTTGCTTCG
GGCTCGCTGT CGCACCGGCT GTGGCCGAAC AAGGATCTCG GTCCCGATGC CTGGACCACC
ATCGCCAGTG AGTTCAATCG TCAGGTCGAC CTGCGGGTGC TGCAGCTTTG GCAGGAGCGG
CGTTACCGCG AATTCGCCGC GATGCTCCCG GACTACGCGG TCAAGTGCAA CGGCGAAGGC
GGCATGGCCG ATACCGTGAT GCTGTTCGCA GCGCTCGGGT GGGACGATTA CACCGGCGAA
GCCGAGCCAT TGTGCGATTA TTTCCCCTCC AGCGGCTCGG GCCAAGTCAA TGTCGAATTT
CATGTGAGTT AA
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| Protein sequence | MGKLVLAAKV SHVPSLMLSE TSESPLRQAR AGAVAALREL GRRAKEREVT TFVVFDTHWL
SNFGYHINAN AQHRGSFTSH EAPHMIQDLR YDLPGDPALA QAIAAEAQSH GLKVLAHQVP
TLGLEYGTIV PMHYLNPDGW AKVVSIASPL FTSIEESRAL GEATRHAIDA SDERVAILAS
GSLSHRLWPN KDLGPDAWTT IASEFNRQVD LRVLQLWQER RYREFAAMLP DYAVKCNGEG
GMADTVMLFA ALGWDDYTGE AEPLCDYFPS SGSGQVNVEF HVS
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