68 homologs were found in PanDaTox collection
for query gene Bphyt_5827 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_5827  3,4-dihydroxyphenylacetate 2,3-dioxygenase  100 
 
 
287 aa  602  1.0000000000000001e-171  Burkholderia phytofirmans PsJN  Bacteria  normal  0.121868  normal  0.292113 
 
 
-
 
NC_007952  Bxe_B2031  3,4-dihydroxyphenylacetate 2,3-dioxygenase(HpaD)  96.15 
 
 
287 aa  584  1e-166  Burkholderia xenovorans LB400  Bacteria  normal  0.412165  normal  0.21533 
 
 
-
 
NC_012791  Vapar_0242  3,4-dihydroxyphenylacetate 2,3-dioxygenase  80.84 
 
 
291 aa  496  1e-139  Variovorax paradoxus S110  Bacteria  normal  0.393613  n/a   
 
 
-
 
NC_009656  PSPA7_0968  homoprotocatechuate 2,3-dioxygenase  72.79 
 
 
307 aa  431  1e-120  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3169  3,4-dihydroxyphenylacetate 2,3-dioxygenase  73.24 
 
 
309 aa  431  1e-120  Marinomonas sp. MWYL1  Bacteria  normal  0.567995  normal 
 
 
-
 
NC_010322  PputGB1_3499  3,4-dihydroxyphenylacetate 2,3-dioxygenase  72.54 
 
 
307 aa  432  1e-120  Pseudomonas putida GB-1  Bacteria  normal  0.242751  normal 
 
 
-
 
NC_008463  PA14_10620  homoprotocatechuate 2,3-dioxygenase  72.79 
 
 
307 aa  431  1e-120  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3528  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.53 
 
 
305 aa  419  1e-116  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0958832  normal 
 
 
-
 
NC_010515  Bcenmc03_3283  3,4-dihydroxyphenylacetate 2,3-dioxygenase  69.5 
 
 
282 aa  413  1e-114  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.225438  normal  0.128816 
 
 
-
 
NC_007511  Bcep18194_B1780  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  68.55 
 
 
282 aa  412  1e-114  Burkholderia sp. 383  Bacteria  normal  normal  0.112809 
 
 
-
 
NC_008543  Bcen2424_4234  3,4-dihydroxyphenylacetate 2,3-dioxygenase  69.5 
 
 
282 aa  412  1e-114  Burkholderia cenocepacia HI2424  Bacteria  normal  0.128738  normal  0.0818305 
 
 
-
 
NC_008061  Bcen_4132  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  69.5 
 
 
282 aa  412  1e-114  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0541165  n/a   
 
 
-
 
NC_010086  Bmul_4371  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.44 
 
 
282 aa  408  1e-113  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4130  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.55 
 
 
282 aa  408  1e-113  Burkholderia ambifaria MC40-6  Bacteria  normal  0.225461  normal 
 
 
-
 
NC_010682  Rpic_1957  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.79 
 
 
289 aa  407  1e-113  Ralstonia pickettii 12J  Bacteria  normal  0.116994  normal  0.0908545 
 
 
-
 
NC_008391  Bamb_3656  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.2 
 
 
282 aa  407  1.0000000000000001e-112  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.492492 
 
 
-
 
NC_012856  Rpic12D_1629  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.79 
 
 
289 aa  406  1.0000000000000001e-112  Ralstonia pickettii 12D  Bacteria  normal  normal  0.405042 
 
 
-
 
NC_007650  BTH_II1732  3,4-dihydroxyphenylacetate 2,3-dioxygenase  68.44 
 
 
282 aa  403  1e-111  Burkholderia thailandensis E264  Bacteria  normal  0.157568  n/a   
 
 
-
 
NC_006349  BMAA1137  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0103  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia mallei NCTC 10229  Bacteria  normal  0.547527  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2267  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1026  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0941  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1510  3,4-dihydroxyphenylacetate 2,3-dioxygenase  67.73 
 
 
282 aa  398  9.999999999999999e-111  Burkholderia mallei NCTC 10247  Bacteria  normal  0.134122  n/a   
 
 
-
 
NC_009832  Spro_0628  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.11 
 
 
285 aa  394  1e-109  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_011083  SeHA_C1213  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.343521  normal  0.923917 
 
 
-
 
NC_009800  EcHS_A4582  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  388  1e-107  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_04228  Homoprotocatechuate dyoxygenase  64.46 
 
 
283 aa  388  1e-107  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
NC_012892  B21_04194  hypothetical protein  64.46 
 
 
283 aa  388  1e-107  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3704  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  388  1e-107  Escherichia coli ATCC 8739  Bacteria  normal  normal  0.17743 
 
 
-
 
NC_011205  SeD_A1178  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_010658  SbBS512_E4888  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  388  1e-107  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1062  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1167  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.46 
 
 
283 aa  390  1e-107  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.907464  normal 
 
 
-
 
NC_011080  SNSL254_A1198  3,4-dihydroxyphenylacetate 2,3-dioxygenase  64.11 
 
 
283 aa  389  1e-107  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.896873 
 
 
-
 
NC_009708  YpsIP31758_2362  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.54 
 
 
285 aa  378  1e-104  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2458  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.19 
 
 
285 aa  376  1e-103  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1645  3,4-dihydroxyphenylacetate 2,3-dioxygenase  62.19 
 
 
285 aa  375  1e-103  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7520  3,4-dihydroxyphenylacetate 2,3-dioxygenase  46.45 
 
 
285 aa  255  7e-67  Streptosporangium roseum DSM 43021  Bacteria  normal  0.261436  normal 
 
 
-
 
NC_007778  RPB_3868  3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD_Fe  48.24 
 
 
283 aa  248  8e-65  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.90869 
 
 
-
 
NC_011004  Rpal_1859  3,4-dihydroxyphenylacetate 2,3-dioxygenase  47.37 
 
 
283 aa  229  4e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.758455  n/a   
 
 
-
 
NC_013411  GYMC61_2301  Extradiol ring-cleavage dioxygenase class III protein subunit B  25.87 
 
 
284 aa  110  4.0000000000000004e-23  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_1623  Extradiol ring-cleavage dioxygenase class III protein subunit B  27.13 
 
 
269 aa  96.7  4e-19  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2607  extradiol ring-cleavage dioxygenase III subunit B  27.78 
 
 
290 aa  95.5  8e-19  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7503  putative dioxygenase  27.18 
 
 
307 aa  90.9  2e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1101  extradiol ring-cleavage dioxygenase III subunit B  27.84 
 
 
303 aa  83.2  0.000000000000005  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.31891 
 
 
-
 
NC_007650  BTH_II0234  class III extradiol-type catecholic dioxygenase, putative  30.69 
 
 
338 aa  82.4  0.000000000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1686  putative dioxygenase  26.86 
 
 
308 aa  77.8  0.0000000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0323  aromatic ring-opening dioxygenase  26.86 
 
 
308 aa  77.8  0.0000000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0233  aromatic ring-opening dioxygenase  26.86 
 
 
308 aa  77.8  0.0000000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  0.329446  n/a   
 
 
-
 
NC_008784  BMASAVP1_0934  aromatic ring-opening dioxygenase  29.9 
 
 
308 aa  74.7  0.000000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1220  aromatic ring-opening dioxygenase  29.9 
 
 
308 aa  74.7  0.000000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.432018  n/a   
 
 
-
 
NC_006349  BMAA1919  putative class III extradiol-type catecholic dioxygenase  29.9 
 
 
308 aa  74.7  0.000000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_0324  hypothetical protein  25.36 
 
 
467 aa  66.2  0.0000000006  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.627251  normal 
 
 
-
 
NC_012034  Athe_0359  hypothetical protein  23.51 
 
 
466 aa  63.5  0.000000004  Anaerocellum thermophilum DSM 6725  Bacteria  hitchhiker  0.0000914729  n/a   
 
 
-
 
NC_010424  Daud_0337  hypothetical protein  27.78 
 
 
470 aa  62  0.00000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.219744  n/a   
 
 
-
 
NC_007005  Psyr_2953  catalytic LigB subunit of aromatic ring-opening dioxygenase  28.49 
 
 
277 aa  59.3  0.00000006  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.66937  normal 
 
 
-
 
NC_007951  Bxe_A1145  2-aminophenol 1,6-dioxygenase, beta subunit  22.99 
 
 
304 aa  58.2  0.0000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1695  hypothetical protein  25.48 
 
 
474 aa  53.5  0.000004  Eggerthella lenta DSM 2243  Bacteria  normal  normal  0.90048 
 
 
-
 
NC_007951  Bxe_A1146  2-aminophenol 1,6-dioxygenase, alpha subunit  20.83 
 
 
270 aa  53.1  0.000005  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0269  hypothetical protein  27.11 
 
 
467 aa  52.8  0.000006  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02098  LigB family enzyme  25.95 
 
 
286 aa  47.8  0.0002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.086093  n/a   
 
 
-
 
NC_010501  PputW619_2014  extradiol ring-cleavage dioxygenase class III protein subunit B  22.66 
 
 
305 aa  48.1  0.0002  Pseudomonas putida W619  Bacteria  normal  normal  0.523696 
 
 
-
 
NC_009997  Sbal195_2964  extradiol ring-cleavage dioxygenase class III protein subunit B  23.88 
 
 
271 aa  47.4  0.0003  Shewanella baltica OS195  Bacteria  normal  0.988157  normal  0.549704 
 
 
-
 
NC_008346  Swol_2294  hypothetical protein  27.04 
 
 
463 aa  46.6  0.0005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.185885  n/a   
 
 
-
 
NC_009438  Sputcn32_1725  extradiol ring-cleavage dioxygenase III subunit B  24.7 
 
 
270 aa  45.4  0.001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_03046  4,5-dopa dioxygenase extradiol  23.21 
 
 
258 aa  44.7  0.002  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0015  hypothetical protein  23.89 
 
 
296 aa  43.1  0.005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.245081 
 
 
-
 
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