Gene Acel_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1101 
Symbol 
ID4485764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1219334 
End bp1220245 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content60% 
IMG OID639729876 
Productextradiol ring-cleavage dioxygenase III subunit B 
Protein accessionYP_872859 
Protein GI117928308 
COG category[S] Function unknown 
COG ID[COG3384] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02298] 3,4-dihydroxyphenylacetate 2,3-dioxygenase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.31891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTGAAG TCGTCGGTGC GGGACTGCTG TCCCATGTGC CAACGATCAT GTTGCCGGAG 
TCCACGCGGC GTGAGTTGTA CGAAGGCAAA GACACCACGC TCGTCGACGG ACTGCGTCGG
CTTCGTACTG AAGTCTTTGA AACGCTCGAC TATGACACGG TCGTCGTCCT TGACTCGCAC
TGGGCGACCA CCGTCGAGTT CGTTGTGACG GCACACCCGC TCCGGGCCGG CCTCTTTACC
TCAGAAGAGC TGCCGCGCGG CATGCGTCGC ATCCCTTACG ACTTCATGGG CGATCCTGAT
CTCGCACATG CCATCGCCGC AGCCGCGGAG AGACACGGCA CCTGGATCAC GGCAATCGAC
GATCCATATT TGCCAATCTT TTACGCCACG GTCAATCTCT GGAAGTATCT GGGGGAGGGA
CTCGATCGGA GGTGGATCTC CCTCAGTGTC TGCCAAACCG CAGATATGGA AGACTTTCTG
CGCGCCGGTC GAGCCCTTGG CGAGGCAATC ATCAACTCTG ATCGCCGTGT CATACTCATC
GCATCCGGCG CGCTGAGCCA TACCTTCTGG CCGCTCCGCG AATTGCGGAA GCATGAAGCC
GCGGGTGTTG AACACATCTT CAGCAGGGAA GCCGCCGATG CCGACAACGA GCGGCTTGCC
TGGTTCCAGA AGGGTGATCA CGCTCAGGTG CTCCGGACGA TGGGGGAGTT CTACCGTTTC
AAGCCGGAGG CGAAATTTGG TCACTACCTT CTGATGATGG GCGCACTCGG CGAGGAGGCC
TGCACGGCAC CCGGGCGGTT ATTCAGTGCA TATGAAAATT CGATCGGCAC GGGACAAGTC
CACGTGTGGT TCGATCGTCC AGAAGGAGGC TTTCCCGCTC CGCGCGCGAC AGACACTCGT
GGCGATGACT GA
 
Protein sequence
MGEVVGAGLL SHVPTIMLPE STRRELYEGK DTTLVDGLRR LRTEVFETLD YDTVVVLDSH 
WATTVEFVVT AHPLRAGLFT SEELPRGMRR IPYDFMGDPD LAHAIAAAAE RHGTWITAID
DPYLPIFYAT VNLWKYLGEG LDRRWISLSV CQTADMEDFL RAGRALGEAI INSDRRVILI
ASGALSHTFW PLRELRKHEA AGVEHIFSRE AADADNERLA WFQKGDHAQV LRTMGEFYRF
KPEAKFGHYL LMMGALGEEA CTAPGRLFSA YENSIGTGQV HVWFDRPEGG FPAPRATDTR
GDD